Gene detail

Gene detail information of Glyur000132s00015963.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G30360.1	2.00E-123	SOS3-interacting protein 4
NR	XP_003534646.1	0	PREDICTED: CBL-interacting serine/threonine-protein kinase 14-like [Glycine max]
COG	YP_007468874.1	1.00E-32	serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprot	tr\|O22932\|CIPKB_ARATH	6.00E-169	CBL-interacting serine/threonine-protein kinase 11
trEMBL	tr\|I1L723\|I1L723_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G41300.1}

Sequence

Transcript Sequence

>Glyur000132s00015963.1
ATGAGAGAGGAGGCAACTACGAACGACACCGTTGCGGCCGAAGAAACACAAACGACGAAGGAGGAGTCGCCACGCGGCGTCGTTTTGTTCGGGAAATACGAGCTTCGAAAATTGCTTGGCGTGGGTGCATCGGCGAAGGTGTATCACGCGACGAACGTGGACACTGGACAGAGCGTGGCGGTTAAGGCGGTGAGCAAGAACAAGGTCCTCCACCAAGGAGGCTTCGGCGCCAGCAACGTGGAGCGCGAGATCTCAATCCTCCACCGCCTCCACCACCCTAACATCATCGAGCTCTACGAGGTCCTCGCCACTAAGACCAAGATTTACTTCGTCGTTGAACTCGCCGCCGGGGGTGAGCTCTTCCACGAGGTCGCCGGCAAGGGAAGACTCTCCGAGGACATCNCCCGGCGATACTTCCGGCAACTAATCTCCGCCGTCAAGCACTGCCACTCACGCGGCGTCTTCCACCGCGACCTCAAGCTCGACAACCTCCTCCTCGACGAGGACGGGAACCTCAAGGTCACGGACTTCGGGTTAAGCGCCGTCACGGACCAGATCCGACCCGACGGGTTGCTCCACACAGTTTGCGGGACACCATCCTACGTGGCACCTGAGATTCTCGCGAAGCGAGGCTACGACGGTGCGAAAGTGGATATCTGGTCATGCGGCGTCGTTTTGTTCTCGCTCACAGCAGGTTACTTGCCTTTCAATGATTACAACCTCACGATTCTGTACCGCAAGATTTACCGCGGGCAATTTCGGTTTCCGAAATGGACGTCTCCTGATCTGAGGAACCTCTTATCACGTTTGTTGGACACGAATCCCGAAACGAGGATTACCGTTGATGAGATTCTTCAAGACCCGTGGTTCTGCTCGGGTGGATACCGGCCCGACCGTGTTTTAATTAAGAAGGGACGTGAGTGGGAGGAGAAGGAGACTCGAACCGGGTTCAAGGCGTTGAATGCGTTTGACTTGATATCGTTTTCGTCCGGGTTGGACATGTCTGGTTTGTTTGAGCACTCTGGTGGGTCGGATTCAGTGGAACGGGTCGTTTCCGGTGAGGCGCCGGAGAGGATTGTGGAGAAGGTGGAGGAGGTGGCGAAAGGGGAAAGGGTGGTGGTGACGCGGATGGAGAACGGTGGTGGGGCCAAGTTGGAAGGGCAGGATGGTAGTTTGATTGCTCTCGTTGTGGTTTACCGGTTAACGGATGAGTTGGTTGTTGTGGAGATGAGGTGGCGTGCACGGGGAGGTGAATGTGGCGCGAGGTTTTGGAAAGATAAATTGCGACCCATGCTTCTTGAATTGGATCTCAATACAGGAAGCGCCGGTCACTCGGTGACTTCTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00132	227650	228996	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0007165 signal transduction

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000132s00015963.1	PF00069.20	Pkinase	33	290	7.90E-72
Glyur000132s00015963.1	PF03822.9	NAF	318	375	3.20E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.099
SRR1783600	control	11.063
SRR1783602	moderate drought stress	22.978
SRR1811619	moderate drought stress	22.896

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	36.934
DRR006520	Root Summer glycyrrhizin high producing strain	36.703
DRR006521	Root Winter glycyrrhizin high producing strain	1.376
DRR006522	Root Winter glycyrrhizin high producing strain	1.393
DRR006523	Root Summer glycyrrhizin low producing strain	34.119
DRR006524	Root Summer glycyrrhizin low producing strain	34.940
DRR006525	Leaf Summer glycyrrhizin high producing strain	33.812
DRR006526	Leaf Summer glycyrrhizin high producing strain	33.856

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	48.728
SRR2868004	Drought Stress (root)	52.477
SRR2967015	Control (root)	36.651

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	37.459
SRR9715740	Leaf	29.961
SRR9715741	Leaf	37.603
SRR9715739	Root	45.981
SRR9715742	Root	53.597
SRR9715743	Root	52.607

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.915
SRR8749028	MeJA induced 9h	5.358
SRR8749029	MeJA induced 9h	3.780
SRR8749030	Uninduced	6.521
SRR8749031	Uninduced	0.203
SRR8749032	Uninduced	3.903

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	34.282
SRR8400027	Control - Root	35.171