Gene detail

Gene detail information of Glyur000132s00015958.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G06920.1	2.00E-28	ovate family protein 4
NR	XP_003551614.1	3.82E-156	PREDICTED: uncharacterized protein LOC100794572 [Glycine max]
Swissprot	tr\|F4HNU8\|OFP4_ARATH	7.00E-40	Transcription repressor OFP4
trEMBL	tr\|I1N3A2\|I1N3A2_SOYBN	1.00E-156	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G44780.1}

Sequence

Transcript Sequence

>Glyur000132s00015958.1
ATGGGGAATAATTACAAGTTCAAATTGTCAGATATGATGCCAAATGCCTGGTTTTACAAGCTGAGGGACATGGGAAGAGGAGCAAGAAAGCAAACAACCCCAACAACAACAACAACAACAACACAGTCAAGGAAGAAGAAAAAACAATCTTTTTTACCATCCTCAACCACACAGTACTCATCAACAACAAAACCAAAGCATCAACCAACCCACCAACAATGCAATCCCAGAAAGTCTTACTACTTTACAAGGGAGCTTAACAACCCAAGCAATAGAATCCACACTTCACCAGCAAACAACAACAACCAAAATGCCCCAGACACCAACACCAATTTCCCAGAACCACCCAGAAAATCATCATCCAGACAAAGACCAAAGAGAAGAACAACAACACCAAGGACTTGTTCCCCAAAACATGTCACCCCCTCTGAGAACTCTTCATCCCNACTTGATAGCTCTGCTGAATCAGAATCCCCTGACCCAGAAATCAGAACAGACCGTGTTCTTCCCACTGAGTCATTCGATGAAACGGTTTCNCCATGGTCCAACTCCAATGACATCATCATCGATGTAGACAACAATTCCATAGCCAGAAAAGATGACAAGCTAGATGGTTATGAATATGATTCATTATCAAAGTTCATGCTTCCACCAATTGTGACCAAGCCAGCAAAGTTCAATGACNTTCTCAACGATGCAAAGAAGAAAGAAACAAAACCCAGAAGCAGAATCTCCACACATGAAGAACAACACAAAAACGTGAAGGGGTCACTGAAAGTCAAGATTGTGAAGGAAGAACAGAGAGAACAGAGGAACATGAACACCCCTGTTAGTACTAGTAAGAGATTCTCTGTGAGTTCCCCTGGTGTGAAGCTAAGGATCAATTCACCGAGAATTGGAAGCCGGAGAGTTCAGGCACATGGCCGGAAAAGAACGTCTTCATCCGGTGCTGGCGCCGGCTTCCGGAGAAGTCTTTCGGATAGCTTTGCAATTGTGAAGTCGTCACTGAATCCACAGAGGGATTTCAGAGAGTCAATGGTGGAGATGATTGTGCAGAACAACATCAGGACATCGAAGGAGTTGGAAGATCTTCTTGCTTGCTACCTTTCTTTGAACTCAGATGAGTATCATGACCTTATTATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATAATCAGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00132	207919	209109	-

Gene family

Gene family	subfamily
Transcription Factors Family	OFP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000132s00015958.1	PF13724.1	DNA_binding_2	1	46	1.00E-18
Glyur000132s00015958.1	PF04844.8	Ovate	335	392	1.10E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	59.976
SRR1783600	control	59.861
SRR1783602	moderate drought stress	31.481
SRR1811619	moderate drought stress	30.820

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.654
DRR006520	Root Summer glycyrrhizin high producing strain	7.567
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	9.219
DRR006524	Root Summer glycyrrhizin low producing strain	9.345
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.696
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.836

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.856
SRR2868004	Drought Stress (root)	5.979
SRR2967015	Control (root)	7.849

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.860
SRR9715740	Leaf	0.779
SRR9715741	Leaf	1.208
SRR9715739	Root	0.932
SRR9715742	Root	1.654
SRR9715743	Root	1.118

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.304
SRR8749028	MeJA induced 9h	0.700
SRR8749029	MeJA induced 9h	0.130
SRR8749030	Uninduced	0.214
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	55.208
SRR8400027	Control - Root	70.212