Gene detail

Gene detail information of Glyur000132s00015938.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G08760.1	2.00E-177	Protein kinase superfamily protein
NR	XP_004492555.1	0	PREDICTED: probable receptor-like protein kinase At5g15080-like [Cicer arietinum]
COG	YP_006807242.1	1.00E-07	serine/threonine protein kinase [Nocardia brasiliensis ATCC 700358]
Swissprot	tr\|Q9LFP7\|Y5158_ARATH	2.00E-62	Probable receptor-like protein kinase At5g15080
trEMBL	tr\|I1N389\|I1N389_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G44630.1}

Sequence

Transcript Sequence

>Glyur000132s00015938.1
TGCTCATTGGGTTCCATTTTCTCTCTCATAATATACTTTTTTTTAATCTCTCTCTATACAATTCTCAATATTCTTCTAATCTCTCTCTTCTCTTTCTCTCTCTAAAATCTTCACTTCCCAGCCTTTTCAATCTGCTTTCTTTGACTCGATAGGGGGTTTTTCTTCGACGAATCCAAACCACAAAAAGTTCCGATTTTTACTCATTTCTTCGCCAGAGAATCGCTTCACTGTGAATTTTGCATGAGCTGCCATCTCTCTCACAGACATAAACAGTTCTCTACAACAACCTAGTTCTGTACAAAAGGATGGGGTGTTTTACCGTATTGAAGAGCAAGAAGAAAAAGTCTGATCAGATTGTGTATGTAAAACGCATGAGCCATGGTGAGCATGCACCTACAGTACTGCCCGAACCTCAAATTCATACTCGCTCACTCCAGTCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCTGTTCAACCCATTAGTAAAGTCACTAGCAATAGAACACGTGCATTGTCTGCTCCATCAACTCTTGATGCAGCAGAACAAGATGTTTTGGCTTCGATTGAGTATGAGGAACAAGAAGAGTCAAAACAGCGAACTGGATCAATGAAGGAGCAGCGTTCGTCTAGTCCACAACCTTTACCGCTTCCATCTCCTCAGGGCGGCGGTGTACTGAAGGCTGTTGGCAGCTTTAAGTTGGGGACAGCTAGTGGTCCTCTATATGCTTCTGGACCTTTGCCGCTTCCACCTACTAGGTCACTTCGGAACTTTCCATATGAGGAAATTGCTTTTGCTTGCCAATATTTCTCTTCAGATCGATGCATGTCAGAATGTCTTTCATCCACCATATATAAAGCTTCCTTTGGTGACGATGCTTCAAGTTCAAAGAAGTTTGATGCTACTGTCACACGCCTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAACGAGGTTAATACTCTCGCAACTTTGCAGCATCCGAACCTCTGTAAATTGCTAGGATTTCATGCACGCGATGGCTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTATTGTATGGGAGATCAGATGGACCATCGATTGATTGGAATATAAGAATGAAAATTGCAATGTGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAGTTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAAGGAATGCTCACTCCAAAGAGCAACGTATGGAGTTTTGGAATTTTTCTTCTGGAGTTACTGACGGGAAGAAAGAATCTCGATAGCCGTCACCCCAAGGAAGAGAGGAATTTGGTCAAGTGGAGCAAGCCTTTCCTAGCTGACAATTGTCGCTTGTCACTGATCATGGACCCTCAACTCAAGGGTCGCTTTCCTTCCAAAGCAGCGAGAACAATAGCCGACATTGCGCAAAGGTGCCTTCAGAAGGAGCCATCAGAAAGACCCACCATGAGAACTGTTGTTGAGCATCTCAAAATGATACAGGATTTGAAGTACTCTTGCAGGTTCCCACTGCAAGAACCAGCACCAATCTCCGGAAAACAGATGTCAAGATCACCTAGTCTTAACGGCATCGTCTGCCCTCCACCAAGGTCGAGTTTCTCTCCATCCCCGCCATCCGGTGTCCCCCCGGTATCTGTTTCGCCTCCGAGGTTGTCCGGAGTGCCCATCCACCTCCCGCCTCGTGTTTGTTCTTCGACTCTCTCTTTGGAGGAGCTTGATAGGCAAGAAAGCCGCAGGTCATCATCCTCAGCCTCTAGGAGGGCTAGTGTTGAAGGATTTTGATTGTCTATATAGTGTTCATTTTTTATTTTTTATTTTAAATTTCTTTTTTTTTGGGTGTGGTTCAACACAAATTTATAGGAGATAAAGATGTGGTTCTTCCACCTTTTATAATCCCTCAGTGTGAAGCCGAGAGGATGTTCTTTTGTAGATAGTGCAAAGGTTGGTCGACTGGGTTCAAATTAGTTATACCCCATTTATATGAAAAATTTATATTGTCTTTAGCATTTTCCTCCCTTCTTCTCCAGTCCCAAAATGAAAATATATGGGATACGAGAAAAAGTTGCTTTCCCAAGATTCTTAATC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00132	102178	106680	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.Other

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000132s00015938.1	PF07714.12	Pkinase_Tyr	182	444	1.60E-26

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.567
SRR1783600	control	10.595
SRR1783602	moderate drought stress	13.893
SRR1811619	moderate drought stress	13.774

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.232
DRR006520	Root Summer glycyrrhizin high producing strain	9.285
DRR006521	Root Winter glycyrrhizin high producing strain	9.026
DRR006522	Root Winter glycyrrhizin high producing strain	8.825
DRR006523	Root Summer glycyrrhizin low producing strain	38.686
DRR006524	Root Summer glycyrrhizin low producing strain	38.834
DRR006525	Leaf Summer glycyrrhizin high producing strain	17.642
DRR006526	Leaf Summer glycyrrhizin high producing strain	17.444

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.802
SRR2868004	Drought Stress (root)	51.628
SRR2967015	Control (root)	38.027

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	64.017
SRR9715740	Leaf	63.003
SRR9715741	Leaf	79.180
SRR9715739	Root	32.080
SRR9715742	Root	45.114
SRR9715743	Root	40.073

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	51.009
SRR8749028	MeJA induced 9h	62.096
SRR8749029	MeJA induced 9h	51.053
SRR8749030	Uninduced	83.242
SRR8749031	Uninduced	115.906
SRR8749032	Uninduced	89.636

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.576
SRR8400027	Control - Root	26.405