Gene detail information of Glyur000132s00015925 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43180.1 | 1.00E-51 | Protein of unknown function, DUF599 |
| NR | XP_004492566.1 | 5.65E-126 | PREDICTED: uncharacterized protein LOC101499956 [Cicer arietinum] |
| COG | YP_002605130.1 | 2.00E-15 | hypothetical protein HRM2_39080 [Desulfobacterium autotrophicum HRM2] |
| trEMBL | tr|V7B2K8|V7B2K8_PHAVU | 6.00E-123 | Uncharacterized protein {ECO:0000313|EMBL:ESW12069.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00132 | 44019 | 45093 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000132s00015925.1 | PF04654.7 | DUF599 | 10 | 213 | 7.40E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.936 |
| SRR1783600 | control | 1.936 |
| SRR1783602 | moderate drought stress | 1.167 |
| SRR1811619 | moderate drought stress | 1.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.067 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.373 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.753 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.606 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.137 |
| SRR2868004 | Drought Stress (root) | 74.978 |
| SRR2967015 | Control (root) | 69.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.073 |
| SRR9715740 | Leaf | 0.068 |
| SRR9715741 | Leaf | 0.014 |
| SRR9715739 | Root | 2.157 |
| SRR9715742 | Root | 4.992 |
| SRR9715743 | Root | 4.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.077 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.132 |
| SRR8749030 | Uninduced | 0.069 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.141 |
| SRR8400027 | Control - Root | 3.427 |