Gene detail information of Glyur000131s00012995 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24420.1 | 5.00E-28 | alpha/beta-Hydrolases superfamily protein |
| NR | ACU18194.1 | 3.98E-52 | unknown [Glycine max] |
| COG | YP_001699675.1 | 6.00E-25 | sigma factor sigB regulation protein [Lysinibacillus sphaericus C3-41] |
| Swissprot | tr|J9U5U9|DAD2_PETHY | 7.00E-27 | Probable strigolactone esterase DAD2 |
| trEMBL | tr|C6T8P2|C6T8P2_SOYBN | 1.00E-52 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU18194.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00131 | 199503 | 200022 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000131s00012995.1 | PF12697.2 | Abhydrolase_6 | 19 | 112 | 1.40E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.117 |
| SRR1783600 | control | 0.103 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 41.871 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 39.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.731 |
| SRR2868004 | Drought Stress (root) | 1.362 |
| SRR2967015 | Control (root) | 2.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.053 |
| SRR9715740 | Leaf | 26.586 |
| SRR9715741 | Leaf | 20.372 |
| SRR9715739 | Root | 0.515 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.220 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.090 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.915 |
| SRR8400027 | Control - Root | 1.413 |