Gene detail information of Glyur000131s00012994 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24420.1 | 1.00E-37 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004512949.1 | 4.83E-86 | PREDICTED: probable strigolactone esterase D14-like [Cicer arietinum] |
| COG | YP_007125155.1 | 3.00E-23 | alpha/beta hydrolase [Microcoleus sp. PCC 7113] |
| Swissprot | tr|Q9SQR3|D14_ARATH | 2.00E-33 | Probable strigolactone esterase D14 homolog |
| trEMBL | tr|G7KNK3|G7KNK3_MEDTR | 3.00E-84 | Uncharacterized protein {ECO:0000313|EMBL:AFK44339.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00131 | 196559 | 197588 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000131s00012994.1 | PF12697.2 | Abhydrolase_6 | 8 | 137 | 2.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.079 |
| SRR1783602 | moderate drought stress | 0.083 |
| SRR1811619 | moderate drought stress | 0.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.122 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.100 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.529 |
| SRR2868004 | Drought Stress (root) | 1.492 |
| SRR2967015 | Control (root) | 2.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.096 |
| SRR9715740 | Leaf | 28.810 |
| SRR9715741 | Leaf | 19.445 |
| SRR9715739 | Root | 0.034 |
| SRR9715742 | Root | 0.135 |
| SRR9715743 | Root | 0.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.166 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.084 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.490 |
| SRR8400027 | Control - Root | 1.152 |