Gene detail information of Glyur000131s00012992 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18510.1 | 2.00E-08 | |
| NR | KHN32347.1 | 9.08E-35 | hypothetical protein glysoja_032530 [Glycine soja] |
| trEMBL | tr|I1KIT6|I1KIT6_SOYBN | 4.00E-35 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G09780.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00131 | 188977 | 189589 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.019 |
| SRR1783600 | control | 3.854 |
| SRR1783602 | moderate drought stress | 3.582 |
| SRR1811619 | moderate drought stress | 3.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.015 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.294 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.617 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.470 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.290 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.828 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.134 |
| SRR2868004 | Drought Stress (root) | 13.759 |
| SRR2967015 | Control (root) | 12.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.684 |
| SRR9715740 | Leaf | 6.932 |
| SRR9715741 | Leaf | 7.351 |
| SRR9715739 | Root | 2.101 |
| SRR9715742 | Root | 2.166 |
| SRR9715743 | Root | 3.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.123 |
| SRR8749028 | MeJA induced 9h | 0.759 |
| SRR8749029 | MeJA induced 9h | 3.662 |
| SRR8749030 | Uninduced | 2.046 |
| SRR8749031 | Uninduced | 2.336 |
| SRR8749032 | Uninduced | 2.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.901 |
| SRR8400027 | Control - Root | 20.985 |