Gene detail information of Glyur000131s00012990 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73920.1 | 0 | alpha/beta-Hydrolases superfamily protein |
| NR | KEH27073.1 | 0 | alpha/beta hydrolase family protein [Medicago truncatula] |
| Swissprot | tr|Q67ZU1|LIP2_ARATH | 6.00E-20 | Triacylglycerol lipase 2 (Precursor) |
| trEMBL | tr|A0A072UDA9|A0A072UDA9_MEDTR | 0 | Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KEH27073.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00131 | 162397 | 168798 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000131s00012990.1 | PF04083.11 | Abhydro_lipase | 285 | 339 | 3.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.391 |
| SRR1783600 | control | 8.486 |
| SRR1783602 | moderate drought stress | 10.364 |
| SRR1811619 | moderate drought stress | 10.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.836 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.791 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.918 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.471 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.318 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.101 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.041 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.468 |
| SRR2868004 | Drought Stress (root) | 24.318 |
| SRR2967015 | Control (root) | 28.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.266 |
| SRR9715740 | Leaf | 22.120 |
| SRR9715741 | Leaf | 24.752 |
| SRR9715739 | Root | 4.982 |
| SRR9715742 | Root | 11.212 |
| SRR9715743 | Root | 11.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.952 |
| SRR8749028 | MeJA induced 9h | 16.428 |
| SRR8749029 | MeJA induced 9h | 10.674 |
| SRR8749030 | Uninduced | 18.342 |
| SRR8749031 | Uninduced | 40.450 |
| SRR8749032 | Uninduced | 26.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.818 |
| SRR8400027 | Control - Root | 16.312 |