Gene detail

Gene detail information of Glyur000131s00012985

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G18490.1	6.00E-147	Eukaryotic aspartyl protease family protein
NR	XP_007152794.1	0	hypothetical protein PHAVU_004G160200g [Phaseolus vulgaris]
Swissprot	tr\|Q9LS40\|ASPG1_ARATH	0	Protein ASPARTIC PROTEASE IN GUARD CELL 1 (Precursor)
trEMBL	tr\|V7C608\|V7C608_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW24788.1}

Sequence

Transcript Sequence

>Glyur000131s00012985.1
ATGGCTCTGAATCTGAACCCATCCCTCACCATAGTAGCAACACTCTGCATCATCACCATCACAACACTCTCTCTTCTTCCATCAACCACCACCTCAACCCGCACCACCCCATTATCCACCACCACTGTTCTTGACATCTCTTCCACCCTCCACAAAACCCACCAAGTCCTCTCCTTTACCCCTCAACAACTTCTAGAACCTTCTCAAGAAGAAACCCATTTCACCAAAACCCCATCTTCCTCTTNCCCCTTCTCAATCCAGCTACACCCAAGAGAGACCCTCCTCAACGAACACCACAAGGACTACAAAAACCTAGTCTTGGCACGACTCNCCCGCGACTCAGCCCGAGTCAACTCACTCGCGACTCAGCTCCAACTCGCCCTCAGCAGCTTCAATCGCTCGGAGCTCCACCCGACCCAAACGGAGCTCCAGCCGGAAGACCTCTCGACGCCGGTCTCCTCCGGCACCGGCCAGGGTAGCGGCGAGTACTTCACACGCGTCGGTGTGGGTCAACCCGCGAAACCCTTCTACATGGTTCTAGACACAGGAAGCGACGTGAATTGGATCCAATGCAAGCCCTGCTCCGATTGTTACCAACAATCCGACCCGATTTATGACCCGGCCCTATCCACCACTTACGGCCCATTAACCTGCGAGGCCCAACAGTGTCAGGCCCTTGAGGTTTCGGCCTGCAGAAATGGAAAGTGTCTCTATCAGGTTTCTTACGGCGACGGTTCTTTCACCGTTGGGGAGTACGCAACCGAAACGGTGTCGTTTGGTGATTCCGGTTCGGTGAACCGGGTTGCGATTGGGTGCGGGCATGATAATGAGGGTTTGTTCGTTGGTGCTGCTGGGCTTCTTGGGCTTGGTGGTGGGCCCCTCTCATTAACTTCGCAGATCAAAGCGACGTCGTTTTCTTACTGCCTCGTGGACCGTGACTCGGGTGGNTCGTCGACGCTCGAGTTCAACTCGCCTCGACCCGGTGACTCGGTCACTGCTCGACTCGTGAGGAACCAGAAGCTCGACACGTTCTACTACGTTGGGCTCACCGGGATGAGCGTCGGCGGCGAGATGGTTTCCGTGCCGCCGGAGGCTTTCGCNGTTGGCAGTTCCGGCGACGGAGGGATCATCGTTGACTCGGGAACCGCCATAACTCGGTTGCGGACTCAGGTCTATAACTCGGTGCGCGACTCGTTCAAGAGGCTGACTCAGAACCTGCGTTCCGCGGAGGGCGTTGCGCTATTTGACACGTGCTACGACTTGTCGTCTTTGAGGTCCGTGCGAGTGCCAACGGTGTCGTTTCACTTTGNCGGAGACAAAACGTGGGATTTGCCGGCGAAGAATTATTTGATTCCGGTGGACTCTTCGGGAACTTTCTGNTTCGCGTTTGCTCCTACGACGTCGTCTTTGTCCATCATAGGGAATGTGCAGCAACAGGGGACACGTGTCAGTTTCGATCTCGCGAACTCTTTAGTGGGATTCTCGCCCAACAAGTGCTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00131	144752	146251	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004190 aspartic-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000131s00012985.1	PF14543.1	TAXi_N	163	322	6.20E-39
Glyur000131s00012985.1	PF14541.1	TAXi_C	344	496	2.90E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	203.175
SRR1783600	control	205.505
SRR1783602	moderate drought stress	134.604
SRR1811619	moderate drought stress	126.524

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	142.138
DRR006520	Root Summer glycyrrhizin high producing strain	142.620
DRR006521	Root Winter glycyrrhizin high producing strain	5.731
DRR006522	Root Winter glycyrrhizin high producing strain	5.534
DRR006523	Root Summer glycyrrhizin low producing strain	217.028
DRR006524	Root Summer glycyrrhizin low producing strain	219.035
DRR006525	Leaf Summer glycyrrhizin high producing strain	114.545
DRR006526	Leaf Summer glycyrrhizin high producing strain	114.027

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	123.235
SRR2868004	Drought Stress (root)	81.574
SRR2967015	Control (root)	116.853

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	98.529
SRR9715740	Leaf	95.128
SRR9715741	Leaf	43.552
SRR9715739	Root	458.816
SRR9715742	Root	236.698
SRR9715743	Root	270.239

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	60.345
SRR8749028	MeJA induced 9h	35.445
SRR8749029	MeJA induced 9h	18.890
SRR8749030	Uninduced	2.684
SRR8749031	Uninduced	0.308
SRR8749032	Uninduced	0.996

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	125.744
SRR8400027	Control - Root	167.378