Gene detail information of Glyur000131s00012974 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| Swissprot | tr|P28639|DHN1_PEA | 4.00E-06 | Dehydrin DHN1 |
| trEMBL | tr|A0A059AI61|A0A059AI61_EUCGR | 2.00E-06 | Uncharacterized protein {ECO:0000313|EMBL:KCW53080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00131 | 61923 | 62297 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000131s00012974.1 | PF00257.14 | Dehydrin | 16 | 120 | 2.60E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.872 |
| SRR1783600 | control | 0.907 |
| SRR1783602 | moderate drought stress | 2.757 |
| SRR1811619 | moderate drought stress | 2.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 75.650 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 73.456 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20193.742 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19664.309 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.591 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.931 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.399 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.875 |
| SRR2868004 | Drought Stress (root) | 0.517 |
| SRR2967015 | Control (root) | 0.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.309 |
| SRR9715740 | Leaf | 1.971 |
| SRR9715741 | Leaf | 0.745 |
| SRR9715739 | Root | 4.339 |
| SRR9715742 | Root | 10.437 |
| SRR9715743 | Root | 11.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.045 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.108 |
| SRR8400027 | Control - Root | 3.680 |