Gene detail information of Glyur000131s00012973 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | BAH70484.1 | 8.18E-09 | dehydrin b [Vicia monantha] |
| Swissprot | tr|P28639|DHN1_PEA | 2.00E-09 | Dehydrin DHN1 |
| trEMBL | tr|C4TP27|C4TP27_9FABA | 3.00E-09 | Dehydrin b {ECO:0000313|EMBL:BAH70484.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00131 | 49362 | 57899 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 3.905 |
| SRR1811619 | moderate drought stress | 3.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.487 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.438 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3430.641 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3262.055 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.649 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.471 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 382.799 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 379.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.179 |
| SRR2868004 | Drought Stress (root) | 5.648 |
| SRR2967015 | Control (root) | 15.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 133.418 |
| SRR9715740 | Leaf | 319.120 |
| SRR9715741 | Leaf | 153.492 |
| SRR9715739 | Root | 0.971 |
| SRR9715742 | Root | 21.739 |
| SRR9715743 | Root | 13.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.186 |
| SRR8749028 | MeJA induced 9h | 2.308 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.358 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.525 |
| SRR8400027 | Control - Root | 2.282 |