Gene detail information of Glyur000131s00012970 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | BAH70484.1 | 1.29E-09 | dehydrin b [Vicia monantha] |
| Swissprot | tr|P28639|DHN1_PEA | 2.00E-07 | Dehydrin DHN1 |
| trEMBL | tr|C4TP27|C4TP27_9FABA | 5.00E-10 | Dehydrin b {ECO:0000313|EMBL:BAH70484.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00131 | 31384 | 31803 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000131s00012970.1 | PF00257.14 | Dehydrin | 16 | 136 | 8.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.923 |
| SRR1783600 | control | 30.592 |
| SRR1783602 | moderate drought stress | 45.651 |
| SRR1811619 | moderate drought stress | 46.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 158.228 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 118.425 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21403.521 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19866.133 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.938 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.779 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 75.810 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 105.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.676 |
| SRR2868004 | Drought Stress (root) | 2.416 |
| SRR2967015 | Control (root) | 9.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 44.548 |
| SRR9715740 | Leaf | 130.619 |
| SRR9715741 | Leaf | 47.620 |
| SRR9715739 | Root | 35.048 |
| SRR9715742 | Root | 100.637 |
| SRR9715743 | Root | 82.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.081 |
| SRR8749028 | MeJA induced 9h | 2.105 |
| SRR8749029 | MeJA induced 9h | 0.036 |
| SRR8749030 | Uninduced | 0.227 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 171.249 |
| SRR8400027 | Control - Root | 31.529 |