Gene detail

Gene detail information of Glyur000130s00006927

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G27670.1	ARM repeat superfamily protein
NR	XP_004489220.1	PREDICTED: uncharacterized protein LOC101510100 isoform X1 [Cicer arietinum]
Swissprot	tr\|Q7XZF5\|RST1_ARATH	Protein RST1
trEMBL	tr\|G7KPZ5\|G7KPZ5_MEDTR	Protein resurrection protein, putative {ECO:0000313\|EMBL:AES74360.2}

Sequence

Transcript Sequence

>Glyur000130s00006927.1
GTAAGAAGGAATGGGGTGAAAGTGAAGGGATGAACGAATCATAGATAAATGTGAACTCTCTGAATTTGGCTGCAGTGTGGGAGAGAGTGAACTCAACTGAGTGAGGATGGAGTCTTATGGTCCTCTCTTGGAGAAGACCCGAGTCCCACAANCGGGTCTCCAAAAACTGGCCGTTAATTCCATATTCTCGAAGCTCCGATCAGCGCCCAAGTATCTCGACCCGGAATCCGAACCCGGAAGACGCGCCATCACACAGTGCCTCACTTCAGCTTCCCCTAACGTCGTCGACCAATCCGTCCGCCAACTATGCCGCCTCGTCACGGACTCCGTCATCTCCGTCAACCGCGGTCTCATGGAGCTCCAATCCGCACTCGAAGGATCCGACCCGAAACTCGTCCCCGTTTTCGTCAAGGGACTCGGATTCCTCGTTCGCTTCGGTTTCCGCAACAACAATGCCTCCTGGCGCTTCCCTTCCACCCTCACTCACCCTTTTGTTATGGTGTTGTCGTGCCGGTCGGAAGTTCAACCTGAGCTTCTGCAGCAAGTGTTGTTGTTTATGTTACAGAATAAGCAGCTGGGAATGGTGCAAGTTTGTGAATTTTTGAGGCCCTTGTTGAATTTTTCGACCATAAGATTGTCAGTTTCAGAGTCATCCTCTTCTTCATTTGGGATGCAACTGGTATTGTCTATGGCGTCATTCTGTTGCTCATTTCCGAGTGAGTCTATGCCTGTTTTTAAGCTGCTTATGGGATGCCTTAAGTATCTTCCACATGAGACTTCTGAAGACCATAGGAAATTAGTATTTGTTGTAGAACATATGGCGGAGGCGTATATAGTGGTACTGAAATCTCTGGCTGGAGAGAAATCGCTGATCACTGAGGCTCAACTATGTGCTGTTGAATTTCTGGGAACAATTATGTCTCTGTTGACGTGTCTCCGGTGGCACCCAGGTGCTCATGAGCCCATATTTGAACTCTCAAGGCGCTTGTTGTCTGTACAGAAAGATCTTGGGTTGAGATGGGAGCCTGGTTTGTCATCGACTATGGTATCATTATTCACAATGCTTGTTCAATCAGAACTTGAGCATGAACAAATTTCTATATTGAAATTTGTTCTCTTAATCATGAAGTGGAAATATGATAAGGATGATCCTATCAGCAGAACTATATCCGCTCCATTTGAAGAGATTTTGTTTCTACTTCCCGTTGTCAGCCTCATGTCATCTCCTTCCAAATCTGTGAAAGCACTGGCTACTAATTTGCTTCTCCTCTTGGAGAAGCTCCTTGTCAAGATGTTGGCGGCACCAAAACATAAACCAATCATCGAGGAGGGAGTTCATTATCTTAGCACACCAGGAATTATATTTTTGAGACTTTTGCGACATCTGTGGTATCAGGACGAAGAATCTTCTTCCAGAATTTCCCTTCTGAATTTGGCTTTAAAGGGCATGAATGAAAGTGAAACAATGCATGATAAACCAATATCTTGGGTTTCTCATGTAAGAGGGTTCTGTTTGTCAATTGTTGACCGACGAAAATCTTCATTGCCTCCCTCGCTTTCTCAGGAAGTGTTTTCAACCGAGGTGCCCCTATNACTCAGTGCTGTTCTCGGTGTTTTATTGATACATCCATCAATGGGGGCTGCTGCTGTTGATTCTCTGTCTTCCATTGCCATTATGGATCCCAGACTCGGAGTTCCTTTGTTGCTTACAATTATGTTTTACAGTAATTTATTCACGAGAAATGATGTCTTTTGCCATGATATGTTGCTAAAAATTTTAGAAATGCTGCCATCACTTGCTTCACACTCAGCAATGATTCCACTTGTAGTCCAAACTATCTTGCCAATGCTTAACAAAGATGCAAAAGTCTCATTATATGCTACAGCAGCTCGATTACTGTGTCGAACCTGGGAGATCAATGATAGAGCCTTTGGAAGTTTGCAAGGTGTCTTGCTCCCTAAAGGTTTCACTGATTTCATGTCAGATAGAGTTATCTGTATCAGCTTGGCTGCTTCCATTCGAGATGTTTGCCATAAAAGCCCTGATAGGGGTGTTGATCTGATCTTGTCTGTTTCGTCTTGTATTGAGTGCCAAGATCCTGCAATTAAAGCTCTCGGTTTGCAAAGCCTTGCCCACCTTTGTGAAGCAGATGTGATTGATTTTTACACTGCATGGGATGTCATTGCAAAGTACGTGCAGGGTTATCTAGATGGTCCTATTCTTGCACATAGCATTTGCCTTCTGCTAAGGTGGGGTGCAATGGATGCAGAAGCATATCCAGAAGCATCAAAGGGTGTGCTGCAAATTTTGTGGGATGTGGTTACCTCTGGTAAGGAGACAAAGTGGGAAAAAGCAAGAATATCGGCCCTGGAGGCACTTACCCAATATGAAGTGTGGCAGCTTGAAAAAAGTATTCCAGATTTTAAGAAAATGATTTTGGAGCTGTTCTTTTCTGAGACAAATCCTAAAATACTCAAGGTTATGGGGGATTTTCATGTCAAGATAATAACACATGAGCACATAAATCGCCGAAGGTTAGTCAAAGGGAAAAGAGTTACAGGAAGTAAAATTGAAAAGCTGGTGGATGTATTTCCACAGGTTATATTCTCTTCAGGNAAGACAAGTGAGGCTAGAGAATTACCTGGTGCAGCTTTGTTATGTTTTTCTTTTACTCCTAAAAATGTGAATGAACATCAGGCATCAAAATGGCCAAGATATGTACATGCTGCATATGAGAACGCTCTCGTGGAAATAGCTGCTTCTCTTCAGCTCTCGAGAAATATCTTGCTCGCACTTATGGCACTGCAATCATGGAAAGACTTCATGCGACGTTGGATGAAGGCTTACATTCTGTCCTATGATGCTAAGGCACAATTAAGTGTCCTAGATAAAACTTCTAAAGCTGCTAGTGATATTTTGAAGAGTATGATGGCAATAGCAGATGAGGCTATACCTAGAGCTGCTGAAAATATTGCACTGGCTATTGGTGCATTCTGTGTGGTTTTGCCTCCATCTGTTCACACTGTTAAATCTGCTGCTTCAAAGTTTCTTTTGGAGTGGTTGCTCCAACATGAACATGAACATCGCCAATGGTCTGCTGCAATTTCTCTTGGATTAATCTCAAGCTGCCTTCATGTAACCGATCATAAAGAGAGATATGATAACATCACAGGACTTCTTGAGGTTCTTTTTGTTAGTAAAAGTTCCCTTGTGAAAGGAGCATGTGGTGTTGGATTGGGTTTTTCGTGNCAAGATCTTCTTACCAGGGTTGAAGCTGCTGATGACTCTACTGTCAAAAAGGAAACAGAAAAGGTTCCAGAATCAGAATTACTAGGAAGAATTGTTCGGGCCTTNGCTACAATGATACAAGAGAGAACTCGATGTTCTTCCGGTGTTTTGGATAGTCTATGTTCATGCTTTCCTCTTGGTTATGATGTGAATGCTAAAGTATCTGAACTGTCATCTGAGGACACTGATGACTTGGAAGAAGATATATGGGGTGTTGCTGGACTTGTTCTTGGTTTGGCTACCTCCATTAGTGCAATATACAGAGCTGGAAAGTTAGAAGCTGTTATCAAGATAAAAAACTTGGTAATATCATGGCTTCCATGTGTAGGTTCATTATTTCAAAACGCTAATTTGCAGGGGAAAGAATCTGGTGTTGTTTTAGCACTAGGATCCTGTATTGCACTTCCCACGATAGTGGCTTTTTGCCAGAGAATGGANTTGATGGATGATACTGAGTTGGACCGTATTGTGCTTGGCTTTAAAGAGTTTGTTTCTGAGTTAATATCTGTTAAAAAGTCTGGTGNGTTGCACCATAGTTTGCTGATGGCATCATGCATTGGAGCAGGGACAGTAATTTCTTGTATACTGAATGAAGGTGTTCACTCTATTGAGGTTGAACATGTTAAATATTTACTGGAACTGTTCAAGAAATGTTACTCCAATCCTTTCCCTTATCTTGTCCATCTTGGTGGTATGCTAGGAGTAGTTAGTGCTATGGGAGCAGGTACAGGGATTTTGGTCTATATGAATTTTCCAAATTACACTAAGCAATCTGGTTATCAGAAGGAGGATTCTTCTTCTGTCATGAGTCCTCTCCTGTCAAGTTCTGTCTTTGAACCATACTTGACACCATTGGTGCAAGAGATGTTTCTTGTGGCACAGAATTCTGATAATCATCAGCTACAACAGTTTGCTTCCTGGGCACTNGCCTTACTTCGACATCATTTATGGTCCAAGGAACTTTTGGGGGTTGATGGTGATAGGAATGTAGCTGAAACTAATTCAAAACCTGTTTCTCAAAGTTTTCCTGAGGACAGTGTAGTTTTGAAGCTCAGTTTGTGGCTTATGGATTTGAAATACACTGAGCCNGGTAGTATTGTACATGCTGGCACAGTTGTTGCTGTATTAAGGTGCCTTTCTAGAGCTCCCAGGTTACCAAGCATGGATTGGGGGGCAATTATTAGGCGTTGTATGAGATATGGGGCTAAGGTTGGCGAGTTGTTAGCAGCAGATTCTGCTTTTGAGAAAGGAACTCTAAGGGAGGAATGCGTGCTGTTTGCAATAGCTCATGCAAATCAATTTAATTCTCTGCTAACTTTTCTTGATGAGCTATCTGAATTTTCCAGGTTCAAGACACTGGAAATAAATCTGCAATCTTGTCTGCTAATTCATCTAGCAGACCTTGTAAAAGTATATTCAAGCTCCAGGCTTGAGAAACTATTTGGTGATGTGAGTAATCACTTGTCTTCATTTAATTCATCTGAAGAGTATGGCACCGACCAGAAAAGCTTGTTGCGTATTTCATGCTGGAAGGGTCTCTCTGAGTGCCTAGATGAAGTTTCTGTGGACACTTCNGGCCACATATCCCATATTGAGAGATGCATGGAGATTCTATTTACTTTTTTGCCAGTTGTGCAATCTTCTGGCAGTGTAGTGTCAGGGGACTCNAGTTCTGTAGAGGAATGGTCTGAGGCTGTAAGATGCTTAGGGAAGGCTCCACAGAATTGGTTATTGGATTTCCTGAAGGTTTCACAAGAGGAGTTTGTTCAAAGTGCTTACAAATCTATTGAAGTTCAAAACAAGGTCCATGCTAAGATCAAACTTGTGAANACTGGTTATCTTCCACCAACTGAACTAGGAAAAATGAAATCCTACATACTGAACTCCAAATCACAAGGACTGTGGGATGTTCTCTGTGAAGTTGTGGCGGCTTTGCAACATGCAGAGATAAGTATCAAAAGACAGTGGCTTATTGATGCTCTTGAAATTAGCTGTGTATCCAGTTTTCCTTCCACGGCACTGAAGTTTCTTGGTCTGCTATCTGCTACCTGCTGCAAATATATGCCCTTGATGATTGTGGACCAACAAATGGTACTGAATGATCTACCAGTCACCCTTGTGTCTCTTCTAGCAGACCAAAGCTGGAATGTTGTTGCAGAAACTGTTGTTTCCAATCTCTTTTCATCAACAGAACGTATANATGACTGGGCTATGCACATAGCAGATGGCTCTTATGTCCCAGTTTCACAACCCATTGATGAAAGTGAGAATCATATGGCTGTTTTTCTACNGCAAGTGATGCACCATACATGTGTATTGTTAAAAAGCTACCTGCCATTAGATAAGCAGCTTAGGCTTGCCAGCATGGTTGTTGCTTGAAAATANGTTTGAACCAAAAGTAACTATAAAGTTCCTTTTGAGCAAATGTACTTTTAGACCTTTGAACTGAAAACCAACCACGTGAGATGTCTCTGACAAAAGCATGTAGTTGTACATATATTTTACTTGTCCAATACAGTAAAATTCAGCAGAAGCAGAATGCGTGTTGTA

Protein Sequence

>Glyur000130s00006927.1
MESYGPLLEKTRVPQXGLQKLAVNSIFSKLRSAPKYLDPESEPGRRAITQCLTSASPNVVDQSVRQLCRLVTDSVISVNRGLMELQSALEGSDPKLVPVFVKGLGFLVRFGFRNNNASWRFPSTLTHPFVMVLSCRSEVQPELLQQVLLFMLQNKQLGMVQVCEFLRPLLNFSTIRLSVSESSSSSFGMQLVLSMASFCCSFPSESMPVFKLLMGCLKYLPHETSEDHRKLVFVVEHMAEAYIVVLKSLAGEKSLITEAQLCAVEFLGTIMSLLTCLRWHPGAHEPIFELSRRLLSVQKDLGLRWEPGLSSTMVSLFTMLVQSELEHEQISILKFVLLIMKWKYDKDDPISRTISAPFEEILFLLPVVSLMSSPSKSVKALATNLLLLLEKLLVKMLAAPKHKPIIEEGVHYLSTPGIIFLRLLRHLWYQDEESSSRISLLNLALKGMNESETMHDKPISWVSHVRGFCLSIVDRRKSSLPPSLSQEVFSTEVPLXLSAVLGVLLIHPSMGAAAVDSLSSIAIMDPRLGVPLLLTIMFYSNLFTRNDVFCHDMLLKILEMLPSLASHSAMIPLVVQTILPMLNKDAKVSLYATAARLLCRTWEINDRAFGSLQGVLLPKGFTDFMSDRVICISLAASIRDVCHKSPDRGVDLILSVSSCIECQDPAIKALGLQSLAHLCEADVIDFYTAWDVIAKYVQGYLDGPILAHSICLLLRWGAMDAEAYPEASKGVLQILWDVVTSGKETKWEKARISALEALTQYEVWQLEKSIPDFKKMILELFFSETNPKILKVMGDFHVKIITHEHINRRRLVKGKRVTGSKIEKLVDVFPQVIFSSGKTSEARELPGAALLCFSFTPKNVNEHQASKWPRYVHAAYENALVEIAASLQLSRNILLALMALQSWKDFMRRWMKAYILSYDAKAQLSVLDKTSKAASDILKSMMAIADEAIPRAAENIALAIGAFCVVLPPSVHTVKSAASKFLLEWLLQHEHEHRQWSAAISLGLISSCLHVTDHKERYDNITGLLEVLFVSKSSLVKGACGVGLGFSXQDLLTRVEAADDSTVKKETEKVPESELLGRIVRAXATMIQERTRCSSGVLDSLCSCFPLGYDVNAKVSELSSEDTDDLEEDIWGVAGLVLGLATSISAIYRAGKLEAVIKIKNLVISWLPCVGSLFQNANLQGKESGVVLALGSCIALPTIVAFCQRMXLMDDTELDRIVLGFKEFVSELISVKKSGXLHHSLLMASCIGAGTVISCILNEGVHSIEVEHVKYLLELFKKCYSNPFPYLVHLGGMLGVVSAMGAGTGILVYMNFPNYTKQSGYQKEDSSSVMSPLLSSSVFEPYLTPLVQEMFLVAQNSDNHQLQQFASWALALLRHHLWSKELLGVDGDRNVAETNSKPVSQSFPEDSVVLKLSLWLMDLKYTEPGSIVHAGTVVAVLRCLSRAPRLPSMDWGAIIRRCMRYGAKVGELLAADSAFEKGTLREECVLFAIAHANQFNSLLTFLDELSEFSRFKTLEINLQSCLLIHLADLVKVYSSSRLEKLFGDVSNHLSSFNSSEEYGTDQKSLLRISCWKGLSECLDEVSVDTSGHISHIERCMEILFTFLPVVQSSGSVVSGDSSSVEEWSEAVRCLGKAPQNWLLDFLKVSQEEFVQSAYKSIEVQNKVHAKIKLVXTGYLPPTELGKMKSYILNSKSQGLWDVLCEVVAALQHAEISIKRQWLIDALEISCVSSFPSTALKFLGLLSATCCKYMPLMIVDQQMVLNDLPVTLVSLLADQSWNVVAETVVSNLFSSTERIXDWAMHIADGSYVPVSQPIDESENHMAVFLXQVMHHTCVLLKSYLPLDKQLRLASMVVA

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00130	287950	299645	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005488 binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000130s00006927.1	PF12530.3	DUF3730	82	367	7.10E-31
Glyur000130s00006927.1	PF12530.3	DUF3730	536	758	8.80E-60
Glyur000130s00006927.2	PF12530.3	DUF3730	82	367	7.30E-31
Glyur000130s00006927.2	PF12530.3	DUF3730	593	798	5.90E-59

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.636
SRR1783600	control	14.775
SRR1783602	moderate drought stress	22.895
SRR1811619	moderate drought stress	22.720

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.968
DRR006520	Root Summer glycyrrhizin high producing strain	10.972
DRR006521	Root Winter glycyrrhizin high producing strain	4.145
DRR006522	Root Winter glycyrrhizin high producing strain	4.133
DRR006523	Root Summer glycyrrhizin low producing strain	14.100
DRR006524	Root Summer glycyrrhizin low producing strain	14.084
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.745
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.684

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.188
SRR2868004	Drought Stress (root)	24.055
SRR2967015	Control (root)	24.614

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.272
SRR9715740	Leaf	11.280
SRR9715741	Leaf	12.781
SRR9715739	Root	3.937
SRR9715742	Root	19.086
SRR9715743	Root	16.168

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.951
SRR8749028	MeJA induced 9h	9.627
SRR8749029	MeJA induced 9h	3.096
SRR8749030	Uninduced	1.596
SRR8749031	Uninduced	0.698
SRR8749032	Uninduced	1.234

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	28.198
SRR8400027	Control - Root	26.442