Gene detail information of Glyur000130s00006921 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006488986.1 | 1.21E-32 | PREDICTED: uncharacterized protein LOC102612110 [Citrus sinensis] |
| trEMBL | tr|K7K378|K7K378_SOYBN | 1.00E-44 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G28491.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00130 | 259412 | 266877 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000130s00006921.1 | PF03108.10 | DBD_Tnp_Mut | 242 | 306 | 1.90E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.081 |
| SRR1783600 | control | 5.000 |
| SRR1783602 | moderate drought stress | 6.289 |
| SRR1811619 | moderate drought stress | 6.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.685 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.867 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.991 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.468 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.841 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.847 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.933 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.744 |
| SRR2868004 | Drought Stress (root) | 3.658 |
| SRR2967015 | Control (root) | 8.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.365 |
| SRR9715740 | Leaf | 2.845 |
| SRR9715741 | Leaf | 4.728 |
| SRR9715739 | Root | 0.791 |
| SRR9715742 | Root | 2.799 |
| SRR9715743 | Root | 2.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.445 |
| SRR8400027 | Control - Root | 16.007 |