Gene detail

Gene detail information of Glyur000130s00006909

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G40510.1	3.00E-85	Sucrase/ferredoxin-like family protein
NR	XP_004489235.1	0	PREDICTED: altered inheritance of mitochondria protein 32-like [Cicer arietinum]
COG	YP_002729865.1	4.00E-07	ferredoxin, 2Fe-2S (2FeCpFd) [Persephonella marina EX-H1]
trEMBL	tr\|A0A072U613\|A0A072U613_MEDTR	0	Sucrase/ferredoxin family protein {ECO:0000313\|EMBL:KEH24786.1}

Sequence

Transcript Sequence

>Glyur000130s00006909.1
CGTGGGTGTCACATGGGGTTGGGCCGTTGGGGTGTGGTTTGACTTTGCGCATTGAGGCGCGTTGTAATGTTGGCTATGTTGGCACGACAACGACGAGTCGTTTTCTTCATTACGTGCTACGACTCTGACTTTGTGAAGAAGAAGAAGAAGAAGAAGCTGAAAACATAAAGAAGGGAAAAAGCTATGCCATACTCATAATGCTGCATTCAACTCGTTTCATCAGAATCTGTAATTTCCACAGGAACAGGAACACCACTCTCCCCTTCTCTCTCCTCCCCACCGCAACAATGGCTTCCTCCTCCGCCGCCGCCGTCGACGTCGCCAAGCACGGCTTCTCTCGTCCGGAGATGTACAAGGACAACCTNGCCGGCACCGTCGATGCCTACGACCGCCACGTGTTCCTCTGCTACAAGAACCACCTGGCATGGCCCCCGCGAATCGAGGCCTCCGATTCCGATCCCCTCCACAAACGCATCGCCACCGCTTGGAAAGCTCGCAAAAACGACATCGTTGTTAAGACGAAAATCACGGTGTGCGAGGCGCTTGAGGACGAAGGCTTCTCCGACGGAGACGTCTTGATTTTCCCGGATATGATCAAGTACAGGGGTTTGGAGGAATCGAATGTTGATGGCTTTTTTGATGATGTTATGGTGGGTGGTAAAGCATGGGGTGGTAAAGTGCGGGGTGCATTGGCGGGTTCATATGTTTTTGTATGTGCTCATGGAAGTCGNGACGTGAGGTGTGGTGTTTGTGGGCCCGCTCTGATTGAGAAGCTGAATGAGGAAATCCAGCTGCGGGGATTGAAGGATCAGATATCTGTTATGGCTTGTTCTCATGTTGGTGGCCATAAGTATGCTGGGAATTTAATCATATACAGTCCTGCACCAAATGGAAAAATCATGGGTCACTGGTATGGCTATGTTACTCCTAATGACGTGCCTGCCTTGCTGGACCAACACATTGCCAAGGGAGAGGTCATACAAAAACTTTGGAGGGGGCAAATGGGNCCACCTGTTGCCGAACTTAAGGGAGCAGATGATCACCAGAAACTTGCTGATGGAGGTGATACTCGCAAGGTCAAGAAGAATGATGTAGAAAGTAACAATCTGAGCAACAATGAAAACGTGGCTGGTTGTTGCCAGGGTGTTAATGGGGTTTCATGTTGCAGAAGTGAAAGTTTTGAGCAAAACAAAGGGATTGATAAAACCGCTGAAGCACATAAAAAGCAGGGGAGCCAAACAAGTTGGAGTTGGCCTGTATTGCTGGAGCGTCACATTCTCACATCTGCTGGTATACTTGGAGCTCTGGCAGCTGTGGCTGTGGCTTACAGATTTTATAGAAGGTCAGGCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00130	156157	158606	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000130s00006909.1	PF06999.7	Suc_Fer-like	55	269	8.90E-52

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.388
SRR1783600	control	19.475
SRR1783602	moderate drought stress	22.842
SRR1811619	moderate drought stress	22.464

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.805
DRR006520	Root Summer glycyrrhizin high producing strain	9.510
DRR006521	Root Winter glycyrrhizin high producing strain	7.574
DRR006522	Root Winter glycyrrhizin high producing strain	7.336
DRR006523	Root Summer glycyrrhizin low producing strain	10.262
DRR006524	Root Summer glycyrrhizin low producing strain	9.760
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.870
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.846

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	120.116
SRR2868004	Drought Stress (root)	194.938
SRR2967015	Control (root)	129.379

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	27.214
SRR9715740	Leaf	15.681
SRR9715741	Leaf	21.117
SRR9715739	Root	51.071
SRR9715742	Root	40.593
SRR9715743	Root	44.668

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	41.744
SRR8749028	MeJA induced 9h	101.071
SRR8749029	MeJA induced 9h	58.838
SRR8749030	Uninduced	156.057
SRR8749031	Uninduced	146.346
SRR8749032	Uninduced	56.530

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	106.864
SRR8400027	Control - Root	79.586