Gene detail information of Glyur000130s00006895 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G27520.1 | 6.00E-14 | |
| NR | KEH24759.1 | 8.77E-68 | hypothetical protein MTR_6g004420 [Medicago truncatula] |
| trEMBL | tr|A0A072U4T8|A0A072U4T8_MEDTR | 3.00E-68 | Uncharacterized protein {ECO:0000313|EMBL:KEH24759.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00130 | 81942 | 87972 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.876 |
| SRR1783600 | control | 5.131 |
| SRR1783602 | moderate drought stress | 4.995 |
| SRR1811619 | moderate drought stress | 4.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.838 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.964 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.076 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.722 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.377 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.781 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.684 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.873 |
| SRR2868004 | Drought Stress (root) | 10.560 |
| SRR2967015 | Control (root) | 12.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.374 |
| SRR9715740 | Leaf | 12.893 |
| SRR9715741 | Leaf | 39.419 |
| SRR9715739 | Root | 9.210 |
| SRR9715742 | Root | 30.062 |
| SRR9715743 | Root | 25.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.224 |
| SRR8749028 | MeJA induced 9h | 41.630 |
| SRR8749029 | MeJA induced 9h | 29.077 |
| SRR8749030 | Uninduced | 38.536 |
| SRR8749031 | Uninduced | 35.552 |
| SRR8749032 | Uninduced | 21.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.863 |
| SRR8400027 | Control - Root | 14.801 |