Gene detail information of Glyur000130s00006891 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18280.1 | 4.00E-22 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_003555069.1 | 1.98E-38 | PREDICTED: probable non-specific lipid-transfer protein AKCS9-like [Glycine max] |
| Swissprot | tr|P82353|NLTP2_PRUAR | 1.00E-30 | Non-specific lipid-transfer protein 2 |
| trEMBL | tr|I1N5L5|I1N5L5_SOYBN | 7.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G00710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00130 | 61992 | 62288 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000130s00006891.1 | PF14368.1 | LTP_2 | 13 | 95 | 8.70E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 880.840 |
| SRR1783600 | control | 922.426 |
| SRR1783602 | moderate drought stress | 535.709 |
| SRR1811619 | moderate drought stress | 544.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 591.756 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 599.689 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 62.765 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 55.508 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 590.557 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 582.388 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 203.107 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 204.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.528 |
| SRR2868004 | Drought Stress (root) | 49.872 |
| SRR2967015 | Control (root) | 39.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 244.102 |
| SRR9715740 | Leaf | 195.282 |
| SRR9715741 | Leaf | 263.446 |
| SRR9715739 | Root | 553.957 |
| SRR9715742 | Root | 218.862 |
| SRR9715743 | Root | 257.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 311.338 |
| SRR8749028 | MeJA induced 9h | 146.779 |
| SRR8749029 | MeJA induced 9h | 259.809 |
| SRR8749030 | Uninduced | 203.854 |
| SRR8749031 | Uninduced | 29.695 |
| SRR8749032 | Uninduced | 90.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 476.298 |
| SRR8400027 | Control - Root | 339.193 |