Gene detail information of Glyur000130s00006888 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16210.1 | 0 | HEAT repeat-containing protein |
| NR | XP_004489310.1 | 0 | PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468-like [Cicer arietinum] |
| trEMBL | tr|I1K1M8|I1K1M8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G09170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00130 | 49728 | 57195 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.945 |
| SRR1783600 | control | 0.963 |
| SRR1783602 | moderate drought stress | 0.799 |
| SRR1811619 | moderate drought stress | 0.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.548 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.571 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.095 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.087 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.304 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.269 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.463 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.108 |
| SRR2868004 | Drought Stress (root) | 3.275 |
| SRR2967015 | Control (root) | 2.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.195 |
| SRR9715740 | Leaf | 0.114 |
| SRR9715741 | Leaf | 0.048 |
| SRR9715739 | Root | 0.026 |
| SRR9715742 | Root | 0.165 |
| SRR9715743 | Root | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.631 |
| SRR8749028 | MeJA induced 9h | 3.985 |
| SRR8749029 | MeJA induced 9h | 1.301 |
| SRR8749030 | Uninduced | 1.255 |
| SRR8749031 | Uninduced | 0.667 |
| SRR8749032 | Uninduced | 0.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.382 |
| SRR8400027 | Control - Root | 1.330 |