Gene detail information of Glyur000130s00006880 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03280.1 | 3.00E-30 | |
| NR | XP_004492243.1 | 1.02E-71 | PREDICTED: uncharacterized protein LOC101495409 [Cicer arietinum] |
| trEMBL | tr|M1D0F5|M1D0F5_SOLTU | 2.00E-69 | Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400078616} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00130 | 9466 | 9978 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000130s00006880.1 | PF14009.1 | DUF4228 | 1 | 165 | 5.70E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.908 |
| SRR1783600 | control | 0.960 |
| SRR1783602 | moderate drought stress | 0.551 |
| SRR1811619 | moderate drought stress | 0.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.982 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.565 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.035 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.643 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.881 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.381 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.130 |
| SRR2868004 | Drought Stress (root) | 9.736 |
| SRR2967015 | Control (root) | 26.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.578 |
| SRR9715740 | Leaf | 0.656 |
| SRR9715741 | Leaf | 1.688 |
| SRR9715739 | Root | 112.299 |
| SRR9715742 | Root | 28.686 |
| SRR9715743 | Root | 43.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 83.819 |
| SRR8749028 | MeJA induced 9h | 155.038 |
| SRR8749029 | MeJA induced 9h | 108.287 |
| SRR8749030 | Uninduced | 105.767 |
| SRR8749031 | Uninduced | 32.959 |
| SRR8749032 | Uninduced | 42.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.302 |
| SRR8400027 | Control - Root | 8.430 |