Gene detail information of Glyur000129s00012478 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36890.1 | 7.00E-08 | Nucleotide-diphospho-sugar transferases superfamily protein |
| NR | XP_007156769.1 | 1.42E-10 | hypothetical protein PHAVU_002G016000g [Phaseolus vulgaris] |
| Swissprot | tr|Q8L707|IRX14_ARATH | 3.00E-08 | Probable beta-1,4-xylosyltransferase IRX14 |
| trEMBL | tr|V7CHE2|V7CHE2_PHAVU | 5.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:ESW28763.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00129 | 283854 | 288092 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.586 |
| SRR1783600 | control | 2.375 |
| SRR1783602 | moderate drought stress | 4.724 |
| SRR1811619 | moderate drought stress | 4.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.708 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.644 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.791 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.859 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.608 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.566 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.616 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.512 |
| SRR2868004 | Drought Stress (root) | 1.750 |
| SRR2967015 | Control (root) | 1.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.414 |
| SRR9715740 | Leaf | 0.066 |
| SRR9715741 | Leaf | 0.449 |
| SRR9715739 | Root | 0.200 |
| SRR9715742 | Root | 0.133 |
| SRR9715743 | Root | 0.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.867 |
| SRR8749028 | MeJA induced 9h | 1.788 |
| SRR8749029 | MeJA induced 9h | 2.650 |
| SRR8749030 | Uninduced | 0.313 |
| SRR8749031 | Uninduced | 0.239 |
| SRR8749032 | Uninduced | 0.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.326 |
| SRR8400027 | Control - Root | 2.257 |