Gene detail information of Glyur000129s00012475 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17230.1 | 6.00E-117 | EXORDIUM like 5 |
| NR | XP_004495404.1 | 0 | PREDICTED: uncharacterized protein LOC101515418 [Cicer arietinum] |
| Swissprot | tr|Q9SII5|EXOL5_ARATH | 2.00E-168 | Protein EXORDIUM-like 5 (Precursor) |
| trEMBL | tr|A0A072VXI9|A0A072VXI9_MEDTR | 0 | Phosphate-responsive 1 family protein {ECO:0000313|EMBL:KEH42800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00129 | 256497 | 257549 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000129s00012475.1 | PF04674.7 | Phi_1 | 65 | 346 | 1.10E-114 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 822.337 |
| SRR1783600 | control | 769.345 |
| SRR1783602 | moderate drought stress | 677.256 |
| SRR1811619 | moderate drought stress | 672.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 753.930 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 768.507 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 329.786 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 315.894 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 854.641 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 854.020 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 241.538 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 237.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 144.464 |
| SRR2868004 | Drought Stress (root) | 85.215 |
| SRR2967015 | Control (root) | 160.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 100.443 |
| SRR9715740 | Leaf | 126.080 |
| SRR9715741 | Leaf | 85.920 |
| SRR9715739 | Root | 1022.134 |
| SRR9715742 | Root | 666.407 |
| SRR9715743 | Root | 683.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 148.306 |
| SRR8749028 | MeJA induced 9h | 45.014 |
| SRR8749029 | MeJA induced 9h | 68.856 |
| SRR8749030 | Uninduced | 43.089 |
| SRR8749031 | Uninduced | 5.616 |
| SRR8749032 | Uninduced | 17.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 193.159 |
| SRR8400027 | Control - Root | 343.319 |