Gene detail information of Glyur000129s00012459 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51670.1 | 6.00E-127 | Protein of unknown function (DUF668) |
| NR | XP_004495422.1 | 0 | PREDICTED: uncharacterized protein LOC101492634 [Cicer arietinum] |
| trEMBL | tr|A0A072TFG5|A0A072TFG5_MEDTR | 0 | DUF3475 domain protein {ECO:0000313|EMBL:KEH16122.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00129 | 169087 | 170553 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000129s00012459.1 | PF11961.3 | DUF3475 | 42 | 97 | 4.00E-23 |
| Glyur000129s00012459.1 | PF05003.7 | DUF668 | 327 | 414 | 8.10E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.741 |
| SRR1783600 | control | 2.913 |
| SRR1783602 | moderate drought stress | 5.006 |
| SRR1811619 | moderate drought stress | 3.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.675 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.498 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.770 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.631 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.427 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.692 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.876 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.090 |
| SRR2868004 | Drought Stress (root) | 22.954 |
| SRR2967015 | Control (root) | 22.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.434 |
| SRR9715740 | Leaf | 7.916 |
| SRR9715741 | Leaf | 10.930 |
| SRR9715739 | Root | 15.744 |
| SRR9715742 | Root | 23.744 |
| SRR9715743 | Root | 17.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.128 |
| SRR8749028 | MeJA induced 9h | 5.043 |
| SRR8749029 | MeJA induced 9h | 2.653 |
| SRR8749030 | Uninduced | 0.488 |
| SRR8749031 | Uninduced | 0.313 |
| SRR8749032 | Uninduced | 0.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.740 |
| SRR8400027 | Control - Root | 8.607 |