Gene detail information of Glyur000129s00012453 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62870.1 | 0 | |
| NR | XP_003555532.2 | 0 | PREDICTED: uncharacterized protein LOC100790244 isoform X1 [Glycine max] |
| trEMBL | tr|K7N4V0|K7N4V0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G35504.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00129 | 122121 | 124394 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.232 |
| SRR1783600 | control | 2.272 |
| SRR1783602 | moderate drought stress | 2.000 |
| SRR1811619 | moderate drought stress | 2.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.916 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.913 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.049 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.048 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.698 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.750 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.816 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.262 |
| SRR2868004 | Drought Stress (root) | 3.297 |
| SRR2967015 | Control (root) | 5.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.236 |
| SRR9715740 | Leaf | 0.957 |
| SRR9715741 | Leaf | 1.416 |
| SRR9715739 | Root | 1.663 |
| SRR9715742 | Root | 1.313 |
| SRR9715743 | Root | 1.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.759 |
| SRR8749028 | MeJA induced 9h | 1.121 |
| SRR8749029 | MeJA induced 9h | 0.451 |
| SRR8749030 | Uninduced | 0.056 |
| SRR8749031 | Uninduced | 0.064 |
| SRR8749032 | Uninduced | 0.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.154 |
| SRR8400027 | Control - Root | 8.832 |