Gene detail information of Glyur000129s00012449 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62280.1 | 1.00E-45 | Protein of unknown function (DUF1442) |
| NR | XP_003536191.1 | 2.78E-124 | PREDICTED: uncharacterized protein LOC100775961 [Glycine max] |
| trEMBL | tr|I1NIC6|I1NIC6_SOYBN | 2.00E-124 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G35510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00129 | 106345 | 107209 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000129s00012449.1 | PF07279.6 | DUF1442 | 3 | 226 | 5.20E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.102 |
| SRR1783600 | control | 0.099 |
| SRR1783602 | moderate drought stress | 0.531 |
| SRR1811619 | moderate drought stress | 0.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.514 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.501 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.214 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.405 |
| SRR2868004 | Drought Stress (root) | 4.006 |
| SRR2967015 | Control (root) | 4.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.389 |
| SRR9715740 | Leaf | 1.033 |
| SRR9715741 | Leaf | 0.517 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.086 |
| SRR9715743 | Root | 0.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.019 |
| SRR8400027 | Control - Root | 3.749 |