Gene detail information of Glyur000129s00012428 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004495445.1 | 7.92E-77 | PREDICTED: uncharacterized protein LOC101499862 [Cicer arietinum] |
| trEMBL | tr|V7BDM5|V7BDM5_PHAVU | 6.00E-75 | Uncharacterized protein {ECO:0000313|EMBL:ESW15927.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00129 | 11354 | 12394 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.028 |
| SRR1783600 | control | 6.923 |
| SRR1783602 | moderate drought stress | 6.122 |
| SRR1811619 | moderate drought stress | 5.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.170 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.242 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.263 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.814 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.315 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.229 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.187 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.565 |
| SRR2868004 | Drought Stress (root) | 12.647 |
| SRR2967015 | Control (root) | 11.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.719 |
| SRR9715740 | Leaf | 6.178 |
| SRR9715741 | Leaf | 8.635 |
| SRR9715739 | Root | 5.793 |
| SRR9715742 | Root | 6.587 |
| SRR9715743 | Root | 6.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.213 |
| SRR8749028 | MeJA induced 9h | 6.008 |
| SRR8749029 | MeJA induced 9h | 9.346 |
| SRR8749030 | Uninduced | 2.937 |
| SRR8749031 | Uninduced | 4.129 |
| SRR8749032 | Uninduced | 7.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.636 |
| SRR8400027 | Control - Root | 16.414 |