Gene detail information of Glyur000128s00010816 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10820.1 | 1.00E-139 | Major facilitator superfamily protein |
| NR | XP_006601217.1 | 0 | PREDICTED: probable folate-biopterin transporter 6-like [Glycine max] |
| COG | YP_007127890.1 | 5.00E-51 | folate/biopterin transporter [Gloeocapsa sp. PCC 7428] |
| Swissprot | tr|Q9LEV7|FBT6_ARATH | 0 | Probable folate-biopterin transporter 6 |
| trEMBL | tr|K7MND7|K7MND7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G34120.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 307991 | 310719 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010816.1 | PF03092.11 | BT1 | 67 | 300 | 4.10E-43 |
| Glyur000128s00010816.1 | PF03092.11 | BT1 | 304 | 447 | 4.20E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.757 |
| SRR1783600 | control | 6.934 |
| SRR1783602 | moderate drought stress | 7.287 |
| SRR1811619 | moderate drought stress | 7.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.150 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.649 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.210 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.865 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.870 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.220 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.253 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.073 |
| SRR2868004 | Drought Stress (root) | 12.568 |
| SRR2967015 | Control (root) | 10.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.382 |
| SRR9715740 | Leaf | 16.659 |
| SRR9715741 | Leaf | 15.101 |
| SRR9715739 | Root | 8.019 |
| SRR9715742 | Root | 12.634 |
| SRR9715743 | Root | 9.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.685 |
| SRR8749028 | MeJA induced 9h | 6.046 |
| SRR8749029 | MeJA induced 9h | 3.449 |
| SRR8749030 | Uninduced | 3.945 |
| SRR8749031 | Uninduced | 1.273 |
| SRR8749032 | Uninduced | 1.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.852 |
| SRR8400027 | Control - Root | 8.682 |