Gene detail information of Glyur000128s00010811 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25050.1 | 6.00E-180 | Major facilitator superfamily protein |
| NR | XP_004498793.1 | 0 | PREDICTED: probable folate-biopterin transporter 2-like isoform X2 [Cicer arietinum] |
| COG | YP_001655933.1 | 1.00E-60 | biopterin transport-related protein BT1-like protein [Microcystis aeruginosa NIES-843] |
| Swissprot | tr|Q5FV41|FBT2_ARATH | 0 | Probable folate-biopterin transporter 2 |
| trEMBL | tr|V7CW44|V7CW44_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW33131.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 280773 | 284181 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010811.1 | PF03092.11 | BT1 | 60 | 464 | 1.50E-105 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.395 |
| SRR1783600 | control | 1.334 |
| SRR1783602 | moderate drought stress | 0.751 |
| SRR1811619 | moderate drought stress | 0.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.092 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.073 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.786 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.275 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.483 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.431 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.567 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.415 |
| SRR2868004 | Drought Stress (root) | 12.071 |
| SRR2967015 | Control (root) | 13.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.174 |
| SRR9715740 | Leaf | 18.981 |
| SRR9715741 | Leaf | 15.496 |
| SRR9715739 | Root | 1.873 |
| SRR9715742 | Root | 3.062 |
| SRR9715743 | Root | 3.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.710 |
| SRR8749028 | MeJA induced 9h | 2.871 |
| SRR8749029 | MeJA induced 9h | 3.400 |
| SRR8749030 | Uninduced | 1.071 |
| SRR8749031 | Uninduced | 1.399 |
| SRR8749032 | Uninduced | 1.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.700 |
| SRR8400027 | Control - Root | 8.856 |