Gene detail information of Glyur000128s00010804 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31890.2 | 3.00E-109 | ARM repeat superfamily protein |
| NR | XP_004498787.1 | 0 | PREDICTED: U-box domain-containing protein 6-like [Cicer arietinum] |
| Swissprot | tr|Q9CAG5|PUB7_ARATH | 5.00E-22 | U-box domain-containing protein 7 |
| trEMBL | tr|G7I8B4|G7I8B4_MEDTR | 0 | Armadillo/beta-catenin-like repeat protein {ECO:0000313|EMBL:AES59146.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 237550 | 239699 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.543 |
| SRR1783600 | control | 15.507 |
| SRR1783602 | moderate drought stress | 14.097 |
| SRR1811619 | moderate drought stress | 13.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.632 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.949 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.048 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.069 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.997 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.704 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.764 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.882 |
| SRR2868004 | Drought Stress (root) | 12.486 |
| SRR2967015 | Control (root) | 19.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.542 |
| SRR9715740 | Leaf | 0.115 |
| SRR9715741 | Leaf | 0.627 |
| SRR9715739 | Root | 12.622 |
| SRR9715742 | Root | 7.422 |
| SRR9715743 | Root | 8.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.656 |
| SRR8749028 | MeJA induced 9h | 5.357 |
| SRR8749029 | MeJA induced 9h | 4.914 |
| SRR8749030 | Uninduced | 0.324 |
| SRR8749031 | Uninduced | 0.465 |
| SRR8749032 | Uninduced | 1.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.473 |
| SRR8400027 | Control - Root | 23.281 |