Gene detail information of Glyur000128s00010794 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11000.1 | 4.00E-34 | Plant protein of unknown function (DUF868) |
| NR | KEH39864.1 | 6.16E-106 | DUF868 family protein [Medicago truncatula] |
| trEMBL | tr|A0A072VCZ6|A0A072VCZ6_MEDTR | 2.00E-106 | DUF868 family protein {ECO:0000313|EMBL:KEH39864.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 159475 | 160548 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010794.1 | PF05910.7 | DUF868 | 28 | 356 | 1.70E-59 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.503 |
| SRR1783600 | control | 4.553 |
| SRR1783602 | moderate drought stress | 7.478 |
| SRR1811619 | moderate drought stress | 7.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.295 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.141 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.597 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.635 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 54.115 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.067 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.424 |
| SRR2868004 | Drought Stress (root) | 12.388 |
| SRR2967015 | Control (root) | 13.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.233 |
| SRR9715740 | Leaf | 6.319 |
| SRR9715741 | Leaf | 9.365 |
| SRR9715739 | Root | 22.056 |
| SRR9715742 | Root | 18.960 |
| SRR9715743 | Root | 19.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.506 |
| SRR8749028 | MeJA induced 9h | 3.899 |
| SRR8749029 | MeJA induced 9h | 5.143 |
| SRR8749030 | Uninduced | 5.700 |
| SRR8749031 | Uninduced | 1.123 |
| SRR8749032 | Uninduced | 3.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.552 |
| SRR8400027 | Control - Root | 8.277 |