Gene detail information of Glyur000128s00010793 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25190.1 | 1.00E-31 | Integrase-type DNA-binding superfamily protein |
| NR | XP_003550203.1 | 6.40E-78 | PREDICTED: ethylene-responsive transcription factor ERF003-like [Glycine max] |
| Swissprot | tr|Q94AW5|ERF03_ARATH | 2.00E-65 | Ethylene-responsive transcription factor ERF003 |
| trEMBL | tr|K7MN82|K7MN82_SOYBN | 2.00E-78 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G33075.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 150001 | 151325 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010793.1 | PF00847.15 | AP2 | 94 | 141 | 6.30E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.052 |
| SRR1783600 | control | 2.166 |
| SRR1783602 | moderate drought stress | 1.948 |
| SRR1811619 | moderate drought stress | 1.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.440 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.321 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.824 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.811 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.606 |
| SRR2868004 | Drought Stress (root) | 1.968 |
| SRR2967015 | Control (root) | 1.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.417 |
| SRR9715742 | Root | 0.403 |
| SRR9715743 | Root | 0.420 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.088 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.139 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.993 |
| SRR8400027 | Control - Root | 4.285 |