Gene detail information of Glyur000128s00010788 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G12380.1 | 1.00E-78 | annexin 8 |
| NR | XP_003598648.1 | 6.69E-170 | Annexin-like protein RJ4 [Medicago truncatula] |
| Swissprot | tr|P51074|ANX4_FRAAN | 8.00E-132 | Annexin-like protein RJ4 |
| trEMBL | tr|B7FJY0|B7FJY0_MEDTR | 2.00E-170 | Annexin {ECO:0000256|RuleBase:RU003540} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 124467 | 133119 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010788.1 | PF00191.15 | Annexin | 14 | 77 | 2.60E-21 |
| Glyur000128s00010788.1 | PF00191.15 | Annexin | 86 | 136 | 2.20E-06 |
| Glyur000128s00010788.1 | PF00191.15 | Annexin | 159 | 222 | 1.90E-14 |
| Glyur000128s00010788.1 | PF00191.15 | Annexin | 233 | 269 | 7.80E-08 |
| Glyur000128s00010788.1 | PF00191.15 | Annexin | 285 | 346 | 2.40E-16 |
| Glyur000128s00010788.1 | PF00191.15 | Annexin | 357 | 406 | 5.80E-07 |
| Glyur000128s00010788.1 | PF00191.15 | Annexin | 419 | 483 | 6.10E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.072 |
| SRR1783600 | control | 1.998 |
| SRR1783602 | moderate drought stress | 0.845 |
| SRR1811619 | moderate drought stress | 0.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.261 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.307 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.959 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.702 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.762 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.681 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.450 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.405 |
| SRR2868004 | Drought Stress (root) | 14.856 |
| SRR2967015 | Control (root) | 13.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.054 |
| SRR9715740 | Leaf | 0.400 |
| SRR9715741 | Leaf | 1.007 |
| SRR9715739 | Root | 1.577 |
| SRR9715742 | Root | 1.375 |
| SRR9715743 | Root | 0.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.141 |
| SRR8749028 | MeJA induced 9h | 0.074 |
| SRR8749029 | MeJA induced 9h | 0.215 |
| SRR8749030 | Uninduced | 0.180 |
| SRR8749031 | Uninduced | 0.024 |
| SRR8749032 | Uninduced | 0.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.609 |
| SRR8400027 | Control - Root | 4.690 |