Gene detail information of Glyur000128s00010784 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G27890.1 | 4.00E-71 | NADPH:quinone oxidoreductase |
| NR | XP_003598672.1 | 1.85E-99 | NADPH:quinone oxidoreductase [Medicago truncatula] |
| COG | NP_249895.1 | 3.00E-44 | hypothetical protein PA1204 [Pseudomonas aeruginosa PAO1] |
| Swissprot | tr|Q9LK88|NQR_ARATH | 3.00E-89 | NADPH:quinone oxidoreductase |
| trEMBL | tr|G7IW34|G7IW34_MEDTR | 7.00E-100 | Uncharacterized protein {ECO:0000313|EMBL:AFK34408.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 93449 | 94746 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010784.1 | PF03358.10 | FMN_red | 6 | 154 | 3.00E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.598 |
| SRR1783600 | control | 1.733 |
| SRR1783602 | moderate drought stress | 0.580 |
| SRR1811619 | moderate drought stress | 0.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.181 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.186 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.157 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 108.770 |
| SRR2868004 | Drought Stress (root) | 100.002 |
| SRR2967015 | Control (root) | 70.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.907 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.381 |
| SRR9715739 | Root | 2.516 |
| SRR9715742 | Root | 0.332 |
| SRR9715743 | Root | 1.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 46.499 |
| SRR8749028 | MeJA induced 9h | 38.846 |
| SRR8749029 | MeJA induced 9h | 47.781 |
| SRR8749030 | Uninduced | 19.641 |
| SRR8749031 | Uninduced | 29.410 |
| SRR8749032 | Uninduced | 30.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.729 |
| SRR8400027 | Control - Root | 20.691 |