Gene detail information of Glyur000128s00010775


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G40950.11.00E-38ribosomal protein large subunit 27
NRXP_003538227.13.22E-85PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Glycine max]
COGYP_001356699.11.00E-2750S ribosomal protein L27 [Nitratiruptor sp. SB155-2]
Swissprottr|O65037|RK27_ORYSJ2.00E-6550S ribosomal protein L27, chloroplastic (Precursor)
trEMBLtr|I1LL99|I1LL99_SOYBN1.00E-85Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G21150.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold001286284964965+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000128s00010775.1PF01016.14Ribosomal_L27611322.70E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.907
SRR1783600control25.024
SRR1783602moderate drought stress23.117
SRR1811619moderate drought stress23.327

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.388
DRR006520Root Summer glycyrrhizin high producing strain34.464
DRR006521Root Winter glycyrrhizin high producing strain30.316
DRR006522Root Winter glycyrrhizin high producing strain30.896
DRR006523Root Summer glycyrrhizin low producing strain36.894
DRR006524Root Summer glycyrrhizin low producing strain39.024
DRR006525Leaf Summer glycyrrhizin high producing strain349.341
DRR006526Leaf Summer glycyrrhizin high producing strain349.108

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)25.731
SRR2868004Drought Stress (root)23.804
SRR2967015Control (root)23.696

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf241.858
SRR9715740Leaf275.143
SRR9715741Leaf164.084
SRR9715739Root18.361
SRR9715742Root19.035
SRR9715743Root18.053

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.989
SRR8749028MeJA induced 9h17.460
SRR8749029MeJA induced 9h28.999
SRR8749030Uninduced19.977
SRR8749031Uninduced11.341
SRR8749032Uninduced25.976

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root34.942
SRR8400027Control - Root31.055

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved