Gene detail information of Glyur000128s00010773 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38800.1 | 1.00E-32 | Plant calmodulin-binding protein-related |
| NR | KHN01516.1 | 0 | hypothetical protein glysoja_039631 [Glycine soja] |
| trEMBL | tr|I1JWH8|I1JWH8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G27810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 55108 | 57462 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010773.1 | PF07839.6 | CaM_binding | 653 | 760 | 7.60E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 65.496 |
| SRR1783600 | control | 64.058 |
| SRR1783602 | moderate drought stress | 69.671 |
| SRR1811619 | moderate drought stress | 68.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 68.656 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 68.588 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 136.699 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 131.370 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 88.714 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 87.805 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.979 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.924 |
| SRR2868004 | Drought Stress (root) | 66.039 |
| SRR2967015 | Control (root) | 76.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.305 |
| SRR9715740 | Leaf | 39.039 |
| SRR9715741 | Leaf | 35.166 |
| SRR9715739 | Root | 5.758 |
| SRR9715742 | Root | 53.600 |
| SRR9715743 | Root | 46.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 55.050 |
| SRR8749028 | MeJA induced 9h | 188.979 |
| SRR8749029 | MeJA induced 9h | 72.424 |
| SRR8749030 | Uninduced | 119.114 |
| SRR8749031 | Uninduced | 174.678 |
| SRR8749032 | Uninduced | 110.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 67.325 |
| SRR8400027 | Control - Root | 49.408 |