Gene detail information of Glyur000128s00010772 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G34570.1 | 3.00E-36 | Essential protein Yae1, N-terminal |
| NR | XP_004499831.1 | 7.25E-98 | PREDICTED: uncharacterized protein LOC101488761 isoform X1 [Cicer arietinum] |
| trEMBL | tr|V7AP88|V7AP88_PHAVU | 4.00E-81 | Uncharacterized protein {ECO:0000313|EMBL:ESW07389.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 50389 | 52479 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010772.1 | PF09811.4 | Yae1_N | 54 | 91 | 2.90E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.447 |
| SRR1783600 | control | 0.498 |
| SRR1783602 | moderate drought stress | 1.244 |
| SRR1811619 | moderate drought stress | 1.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.840 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.468 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.451 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.456 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.028 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.820 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.041 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.756 |
| SRR2868004 | Drought Stress (root) | 3.886 |
| SRR2967015 | Control (root) | 3.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.597 |
| SRR9715740 | Leaf | 2.435 |
| SRR9715741 | Leaf | 1.362 |
| SRR9715739 | Root | 0.402 |
| SRR9715742 | Root | 0.329 |
| SRR9715743 | Root | 0.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.066 |
| SRR8749028 | MeJA induced 9h | 3.124 |
| SRR8749029 | MeJA induced 9h | 1.934 |
| SRR8749030 | Uninduced | 2.736 |
| SRR8749031 | Uninduced | 1.868 |
| SRR8749032 | Uninduced | 1.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.109 |
| SRR8400027 | Control - Root | 2.511 |