Gene detail information of Glyur000128s00010766 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65870.1 | 1.00E-35 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | XP_004511258.1 | 5.79E-93 | PREDICTED: disease resistance response protein 206-like [Cicer arietinum] |
| Swissprot | tr|Q9C523|DIR19_ARATH | 4.00E-44 | Dirigent protein 19 (Precursor) |
| trEMBL | tr|I3ST83|I3ST83_MEDTR | 9.00E-92 | Uncharacterized protein {ECO:0000313|EMBL:AFK43475.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 19848 | 31665 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010766.1 | PF03018.9 | Dirigent | 45 | 188 | 3.50E-48 |
| Glyur000128s00010766.1 | PF03018.9 | Dirigent | 234 | 369 | 8.50E-49 |
| Glyur000128s00010766.1 | PF03018.9 | Dirigent | 423 | 555 | 1.30E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 192.009 |
| SRR1783600 | control | 184.170 |
| SRR1783602 | moderate drought stress | 76.164 |
| SRR1811619 | moderate drought stress | 80.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.426 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 49.748 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.111 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.058 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.802 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.377 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.924 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 101.813 |
| SRR2868004 | Drought Stress (root) | 40.522 |
| SRR2967015 | Control (root) | 42.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.254 |
| SRR9715740 | Leaf | 2.236 |
| SRR9715741 | Leaf | 1.979 |
| SRR9715739 | Root | 100.609 |
| SRR9715742 | Root | 92.176 |
| SRR9715743 | Root | 81.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.232 |
| SRR8749028 | MeJA induced 9h | 3.926 |
| SRR8749029 | MeJA induced 9h | 4.166 |
| SRR8749030 | Uninduced | 22.100 |
| SRR8749031 | Uninduced | 21.878 |
| SRR8749032 | Uninduced | 16.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 90.916 |
| SRR8400027 | Control - Root | 70.430 |