Gene detail information of Glyur000128s00010765 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58090.1 | 7.00E-28 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | AFK43475.1 | 2.85E-62 | unknown [Medicago truncatula] |
| Swissprot | tr|F4J4N3|DIR17_ARATH | 4.00E-33 | Dirigent protein 17 |
| trEMBL | tr|I3ST83|I3ST83_MEDTR | 1.00E-62 | Uncharacterized protein {ECO:0000313|EMBL:AFK43475.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 19226 | 19578 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010765.1 | PF03018.9 | Dirigent | 1 | 106 | 1.30E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 64.733 |
| SRR1783600 | control | 70.746 |
| SRR1783602 | moderate drought stress | 36.952 |
| SRR1811619 | moderate drought stress | 37.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 45.992 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.859 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.611 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.679 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 121.631 |
| SRR2868004 | Drought Stress (root) | 47.025 |
| SRR2967015 | Control (root) | 44.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.452 |
| SRR9715740 | Leaf | 2.912 |
| SRR9715741 | Leaf | 1.267 |
| SRR9715739 | Root | 93.144 |
| SRR9715742 | Root | 92.382 |
| SRR9715743 | Root | 88.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.905 |
| SRR8749028 | MeJA induced 9h | 1.442 |
| SRR8749029 | MeJA induced 9h | 0.259 |
| SRR8749030 | Uninduced | 0.361 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 75.947 |
| SRR8400027 | Control - Root | 60.889 |