Gene detail information of Glyur000128s00010764 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G65870.1 | 2.00E-37 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | XP_004511259.1 | 1.07E-97 | PREDICTED: disease resistance response protein 206-like [Cicer arietinum] |
| Swissprot | tr|Q9SS03|DIR21_ARATH | 1.00E-45 | Dirigent protein 21 (Precursor) |
| trEMBL | tr|I3SQ55|I3SQ55_MEDTR | 6.00E-95 | Uncharacterized protein {ECO:0000313|EMBL:AFK42397.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00128 | 9579 | 10061 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000128s00010764.1 | PF03018.9 | Dirigent | 15 | 159 | 6.30E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 989.409 |
| SRR1783600 | control | 917.887 |
| SRR1783602 | moderate drought stress | 414.364 |
| SRR1811619 | moderate drought stress | 407.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 342.382 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 331.565 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.540 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.952 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 70.229 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 71.608 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.759 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 288.202 |
| SRR2868004 | Drought Stress (root) | 93.126 |
| SRR2967015 | Control (root) | 108.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.292 |
| SRR9715740 | Leaf | 9.595 |
| SRR9715741 | Leaf | 9.937 |
| SRR9715739 | Root | 189.525 |
| SRR9715742 | Root | 344.694 |
| SRR9715743 | Root | 288.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 34.836 |
| SRR8749028 | MeJA induced 9h | 30.096 |
| SRR8749029 | MeJA induced 9h | 21.708 |
| SRR8749030 | Uninduced | 10.599 |
| SRR8749031 | Uninduced | 2.487 |
| SRR8749032 | Uninduced | 7.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 245.448 |
| SRR8400027 | Control - Root | 258.913 |