Gene detail information of Glyur000127s00009196 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02040.1 | 1.00E-07 | |
| NR | XP_004508390.1 | 5.77E-82 | PREDICTED: uncharacterized protein LOC101503439 [Cicer arietinum] |
| trEMBL | tr|V7CAB6|V7CAB6_PHAVU | 5.00E-64 | Uncharacterized protein {ECO:0000313|EMBL:ESW27117.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00127 | 296255 | 296857 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 64.426 |
| SRR1783600 | control | 61.175 |
| SRR1783602 | moderate drought stress | 54.184 |
| SRR1811619 | moderate drought stress | 55.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 109.540 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 142.943 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.937 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.128 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 196.615 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 198.624 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 49.046 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.578 |
| SRR2868004 | Drought Stress (root) | 87.657 |
| SRR2967015 | Control (root) | 128.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 137.325 |
| SRR9715740 | Leaf | 85.631 |
| SRR9715741 | Leaf | 125.409 |
| SRR9715739 | Root | 194.577 |
| SRR9715742 | Root | 199.697 |
| SRR9715743 | Root | 228.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.508 |
| SRR8749028 | MeJA induced 9h | 33.801 |
| SRR8749029 | MeJA induced 9h | 28.076 |
| SRR8749030 | Uninduced | 206.620 |
| SRR8749031 | Uninduced | 80.800 |
| SRR8749032 | Uninduced | 129.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.071 |
| SRR8400027 | Control - Root | 39.294 |