Gene detail information of Glyur000127s00009194 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G35160.2 | 0 | Endomembrane protein 70 protein family |
| NR | XP_004508395.1 | 0 | PREDICTED: transmembrane 9 superfamily member 4-like [Cicer arietinum] |
| Swissprot | tr|Q9FYQ8|TMN11_ARATH | 0 | Transmembrane 9 superfamily member 11 {ECO:0000305} (Precursor) |
| trEMBL | tr|I1LZN1|I1LZN1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G22480.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00127 | 287454 | 289427 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000127s00009194.1 | PF02990.11 | EMP70 | 55 | 592 | 1.50E-169 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 68.957 |
| SRR1783600 | control | 68.992 |
| SRR1783602 | moderate drought stress | 37.495 |
| SRR1811619 | moderate drought stress | 37.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 56.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 54.785 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.653 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.732 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.050 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.578 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.800 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 109.055 |
| SRR2868004 | Drought Stress (root) | 68.810 |
| SRR2967015 | Control (root) | 61.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.264 |
| SRR9715740 | Leaf | 20.695 |
| SRR9715741 | Leaf | 25.202 |
| SRR9715739 | Root | 84.666 |
| SRR9715742 | Root | 81.642 |
| SRR9715743 | Root | 80.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 71.877 |
| SRR8749028 | MeJA induced 9h | 64.919 |
| SRR8749029 | MeJA induced 9h | 44.235 |
| SRR8749030 | Uninduced | 15.473 |
| SRR8749031 | Uninduced | 7.322 |
| SRR8749032 | Uninduced | 19.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 96.242 |
| SRR8400027 | Control - Root | 118.383 |