Gene detail information of Glyur000127s00009189 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46490.1 | 2.00E-07 | |
| NR | KHN18592.1 | 5.10E-17 | hypothetical protein glysoja_007005 [Glycine soja] |
| trEMBL | tr|C6SYV5|C6SYV5_SOYBN | 5.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G11310.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00127 | 272412 | 272750 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.892 |
| SRR1783600 | control | 2.117 |
| SRR1783602 | moderate drought stress | 2.249 |
| SRR1811619 | moderate drought stress | 2.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.338 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.168 |
| SRR2868004 | Drought Stress (root) | 5.411 |
| SRR2967015 | Control (root) | 2.650 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.146 |
| SRR9715740 | Leaf | 0.134 |
| SRR9715741 | Leaf | 0.642 |
| SRR9715739 | Root | 1.869 |
| SRR9715742 | Root | 0.243 |
| SRR9715743 | Root | 0.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.726 |
| SRR8400027 | Control - Root | 9.162 |