Gene detail information of Glyur000127s00009184 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25240.1 | 1.00E-09 | |
| NR | XP_003609515.1 | 4.10E-65 | hypothetical protein MTR_4g116530 [Medicago truncatula] |
| trEMBL | tr|G7JHT3|G7JHT3_MEDTR | 2.00E-65 | Stress induced protein {ECO:0000313|EMBL:AES91712.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00127 | 258568 | 259029 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.539 |
| SRR1783600 | control | 0.552 |
| SRR1783602 | moderate drought stress | 1.071 |
| SRR1811619 | moderate drought stress | 1.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.041 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.568 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 103.074 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 102.533 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 49.598 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 51.969 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.384 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.843 |
| SRR2868004 | Drought Stress (root) | 166.107 |
| SRR2967015 | Control (root) | 562.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 873.862 |
| SRR9715740 | Leaf | 530.613 |
| SRR9715741 | Leaf | 880.278 |
| SRR9715739 | Root | 222.117 |
| SRR9715742 | Root | 372.084 |
| SRR9715743 | Root | 369.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 256.610 |
| SRR8749028 | MeJA induced 9h | 450.284 |
| SRR8749029 | MeJA induced 9h | 657.830 |
| SRR8749030 | Uninduced | 761.265 |
| SRR8749031 | Uninduced | 1078.175 |
| SRR8749032 | Uninduced | 1252.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.588 |
| SRR8400027 | Control - Root | 71.156 |