Gene detail

Gene detail information of Glyur000127s00009183.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G46920.1	9.00E-163	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
NR	XP_003609514.1	0	Dual specificity protein kinase pyk2 [Medicago truncatula]
COG	YP_001958461.1	2.00E-27	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q05609\|CTR1_ARATH	2.00E-49	Serine/threonine-protein kinase CTR1
trEMBL	tr\|G7JHT2\|G7JHT2_MEDTR	0	Octicosapeptide/phox/Bem1p domain kinase superfamily protein {ECO:0000313\|EMBL:AES91711.2}

Sequence

Transcript Sequence

>Glyur000127s00009183.1
ATTTTATCCCAATTTTACTAGGGTTTTAATTACACTTTCCAGGATTAGGCCAATTCTATTCTATTCTATTCAATCTCCTGTGATTCTATTTGTTCATCATTGGTTCATTCATTCTTTGTGATCTCAATCAATAGCTTTTTGCAGCCATGGCGTTTGATCAGAATTCCGTTCCAAGGGATCTGCGAACATTGAACGTGGCTGCTGCGACGATGGTTGAGGAGCCTCTCATTTCGCCGGCCACCGTCACCACGCCTCCGACCCCCAATTCAGTCACAGAGTTTTTCTATACGCCGCCGGTCTCCGCCGCCACCGCCGCTAACTGGTGCGTTCGCCCCATTGCGCGTCCCACCGCNATCGGGTTTAACTACGGTTCCGGTTTTGGGAACCGGGTTGTGGCTGGGAATGCTTTGAATTTGGGAAACTGGGTAGGGGCTAATAATAATAATAATAGTAGCATGGACAAGGCCTGCAATGATGGTGCAAATGTAACTGCAAATGGTTTTTCCCATGGTGCCGTTGGGGGCACCAGAGCGTCTGATGATGCCAGTGATGATTCGGTGTCTGGGAGGAAGGTGAAGTTTCTGTGCAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGGGTGCTGAGATATGTTGGAGGGCAGACAAGGATAATTAGTGTTAGGAAAGATGTGAGCTTCAATGATTTGGTGCAGAAGATGGTTGATACTTATGGACAATCTGTGGTTATCAAGTATCAGCTCCCTGAGGAGGATCTTGATGCCTTGGTCTCGGTGTCTTGCCCCGATGATGTTGAGAACATGATGGAGGAGTATGAAAAGCTGGTTGAGAGATCACCTGATGGTTCTGCTAAGTTAAGGGTTTTTCTGTTCCCTGCCTCAGAGATTGAACTTTCTGGTGCCTTGCAGCCCGGGGACATTCAGGATACTGGACAGAAATATTTTGATGCTGTGAATGGGGTTTCAGATGGGAGTGGGATTATTAGTGGTGGGATCAAGAGGAAGGAGAGTATTGCAAGTGCAGCTTCAACCCAGAATTCTGATTTTAGTGGNATAGAGACTTTTGATAGCGGTCAAGGGGAGCCCGTGTGCTTGTTTTCGCCTAAGGATAATGTGGCAGCTTCTCCAGACACAAGTGCAAATTTGGTGGTTTCTGAGCCCGGTACCGCGGTTTACTCAGGCGCTTCTGCTGTTTCCTTTGGCATGCCTGTGGCTATGGCTAGTCCAACTCACACCCCATATATCCATAATGAGGTTGAGCTAGAAAAGCCTGTGCCTGTTACTTTGTCCCAGCAGCCATTTGAGTTGCAGCAATCTGGAATGGAGATTTCACCACCTTCGCCTTATTTGCAGCCTTTTGTTGATCNGCGCCAGGGTGTTATGAACCATGCAGATTATGTCCAGCTGCCTCCCCAGACGGGCTTCCCNAATTCTCAGCTTTTAGGGAAAACTGGGCCTGTCTTCACCCAACAACAGTTTCATGATAATACTNCTGGTTTAGCATTCCATCAGGTAATCCCTGGAGCACAAATGACAATGGCTCAACCTTCTTCTCATGTTGGTGTGAGACCGAATGTCATTCAACCGCAACCATTGATGCAACCACAGCAAAACCGTTTGGACCAATACAATGATGAAAACACATCAGGAATAAGGATTATCCAGCTTCCTTCTGAGCACAGCTATAATACATACAAGGTTCCAGTGACTCAAGTCCCACCTGTCATAGTTGGAGGTAATTATGGTTGGGTTCAGGTTCCTCCACAAGAGNGTGTTGTTTTCTCTGATGGGGTATCACCTCAACAACAGGTAATTATCCCTGAGAAAATCCACCGAGCTGAGGGCTGTACCATGTGTCAGAGAAAGCTACCTCATGCCCATTCAGATCCAGTGGTTCCGGAACAGCATAATAGTGGTGCAGGACCAGTTCCTGATTCAGGACCAAGTTACCATAGTTTCCCCCTGGAGGACAACGTAAAAGCTCAAGCAACAAATCGGGTGAAGCCTGTGGTGACAGCACCCTTGGCGAGCATTGATGAACAAGAGGCCAGGACCAGACCCTGGGTCATTAGCAAGTTGGAATCTCCTGAAGGAGTACCTTTTACCGATAATACTGGGCTTTCTCATAATCTTGAGCCACAGTCTGATGGGGGGAGGATTTTTATGCAAAAGCCAGNAGAATTTGATCATCACAGGAATGCATTTATCCAGGAAACGATTGGAAGGACGGGTGGGAAACAGTCTCCTGGGGATGGGCACATGGCCATGGGAACAACACCACTATCTTATNCAGATGATGTTGTCTACAAGCATATGGTGCCAGTTGAAAACTGGGTTAAACAGGATGGGCTTGTGAATAAATCTGTCAATAATGATATATCTACAGCTGATGGAACAGCTATACAGACTTCGGAGTGTATGGTTCAAGGATCTCCAAAAGAATATACTAACGAGCTTACTGGTGTTGTTTCTAATTCAGATGCAGTGGAAAATTGGATTAGACAGGAACATCTAAAACCTGTTGATGGTAGGATGGATACCTTCAAGACAGGCAATCCCGAAGTTTATGTAAGTAGTGATCAATGCTTGCTGCCAGTTGATAAACCCAATGCGGATGATAAATTAGATTACAACACTCAGCTTGCTGGAGAAGAAGAGGTGATACTGGATAACAACTTTGGCAGGTCAAAATTGATGGTTGATGCAAATCAAATTAAGATGACAGGTGTGCTGCCATGTTCTTCTATGGAAATGTCATACGGGCACACCTCCAGGTCCGGTGAATACAATGAGGTTGCACAACCCCCTATGTTGGACGTTCCACAATCGAAGATTGGAAACTACCACAAGGATGATGCAGCATCATCTTCATCATCACCATCTGTTAGGTTTGGAGATGTGCACGATTCTCCAAACTCACTTTTCAGCAATCAGGANCCCTGGAATATACAGCATGGTACCTTCTTTCCACCTGCTAGACCTAGTAAAGCTGCATTTGAGAACTATTCTTATAAGGATTACTTTGGTGAGGATCCAGGCAAGGATTACTTTGGTGAGGATCCAGGCAACTGTGGGAAACAAAATTTGGAAGTACAATTGGATGATGGCCTCTACCAGTCATTCAAACAGAATTTAACTTTTGAACATGGTCGGTCTGGCAAAGGCTCAACAGAAGACGAACAACTTAAAGCTGTTGCGGAAGATGTAGCAGCTTCTGTTNTGCACCCATGTAGTCCTTCAAATCCTAACTTGCAAGCCAGAGATGTTTCCTTTCATGAAAACATTGAGGATGGAGATATTCAATATAATCTAATAAATGTAAAGTGTAGAGATAAAACTCAGGATGTCAAGAGCAAGCCACCAGAAAAGGCAAATTTTGGCTTTCCAGCATCGGGTGTTGGGCGATTGCAGATTATAAAGAACTGTGACCTTGAAGAGCTGACAGAATTGGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGAGGGGCACTGATGTTGCAATCAAGCGAATTACTGATAGGTGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAGATGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTGGCTTTCTATGGGGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAGTATATGGTNAATGGTTCTCTAAGAAATGCCTTGCAGAAGAATGAGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCAATGGATGTTGCCTTTGGTATGGAATACCTGCATGGAAAAAACATAGTACACTTCGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGCATCATGTGATTACGATGATGTTGGTGACTTGGGTCTATCCAAAGTAAAATGTCAGACACTGATCTCAGGTGGTGTGAGAGGAACTCTTCCGTGGATGGCCCCAGAGCTGCTGAACGGAAGCAGTAGCCTTGTTTCAGAAAAGGTTGATGTGTTTTCATTCGGCATTGTGATGTGGGAACTCTTAACTGGAGAAGAGCCATACGCTGACTTGCACTATGGTGCTATTATAGGTGGAATTGTTAGCAACACTTTGCGCCCTCCGGTTCCCAATTCCTGTGATCTAGAATGGAAAGCCCTGATGGAGAGTTGCTGGTCCTCAGAGCCATCAGAGAGACCCACCTTCACCGAGATCGCTGATGAATTACGTTCTATGGCATCCAAACGCCCAAATCAACAGCTGCAACAAGTCCACAAATGATTTCCCACAACTGCACTGCAGGATACCCCCTTGAACCCCATATTTCTCTCCTTGGAGTTTTTCATCCATTTTGACTCACCAATGCATTTTGCAATACATATCATAGGAAAGGGACGGTTAGGTTTGTCAGTTCACTTCATATAGTAGCATTATGATATGTTTCATTTCTGAGTGGGCAAGAAGAAGAAGAAAAGAAAACATTTTGTTCATATTTTGATGCCTCCTTGTTGAAATGGATATTCTAAAGAGTTTTCACTTATCTGTATTGTTACACCCATTTTTTCTTATCCCTAATGATTATTGTCCATTCATTCAATTTTCTAGTTTCTTCTCATTAATATGCAGTGTGCCCTGCGTGGGAGATGGGTCCCAACTCCCAATTGTACAAACAATTGAGCATGCATGAGTACACACACGGCTTAGATATATGCTTTGCCCCTT

Protein Sequence

>Glyur000127s00009183.1
MAFDQNSVPRDLRTLNVAAATMVEEPLISPATVTTPPTPNSVTEFFYTPPVSAATAANWCVRPIARPTAIGFNYGSGFGNRVVAGNALNLGNWVGANNNNNSSMDKACNDGANVTANGFSHGAVGGTRASDDASDDSVSGRKVKFLCSFGGKILPRPSDGVLRYVGGQTRIISVRKDVSFNDLVQKMVDTYGQSVVIKYQLPEEDLDALVSVSCPDDVENMMEEYEKLVERSPDGSAKLRVFLFPASEIELSGALQPGDIQDTGQKYFDAVNGVSDGSGIISGGIKRKESIASAASTQNSDFSGIETFDSGQGEPVCLFSPKDNVAASPDTSANLVVSEPGTAVYSGASAVSFGMPVAMASPTHTPYIHNEVELEKPVPVTLSQQPFELQQSGMEISPPSPYLQPFVDXRQGVMNHADYVQLPPQTGFPNSQLLGKTGPVFTQQQFHDNTXGLAFHQVIPGAQMTMAQPSSHVGVRPNVIQPQPLMQPQQNRLDQYNDENTSGIRIIQLPSEHSYNTYKVPVTQVPPVIVGGNYGWVQVPPQEXVVFSDGVSPQQQVIIPEKIHRAEGCTMCQRKLPHAHSDPVVPEQHNSGAGPVPDSGPSYHSFPLEDNVKAQATNRVKPVVTAPLASIDEQEARTRPWVISKLESPEGVPFTDNTGLSHNLEPQSDGGRIFMQKPXEFDHHRNAFIQETIGRTGGKQSPGDGHMAMGTTPLSYXDDVVYKHMVPVENWVKQDGLVNKSVNNDISTADGTAIQTSECMVQGSPKEYTNELTGVVSNSDAVENWIRQEHLKPVDGRMDTFKTGNPEVYVSSDQCLLPVDKPNADDKLDYNTQLAGEEEVILDNNFGRSKLMVDANQIKMTGVLPCSSMEMSYGHTSRSGEYNEVAQPPMLDVPQSKIGNYHKDDAASSSSSPSVRFGDVHDSPNSLFSNQXPWNIQHGTFFPPARPSKAAFENYSYKDYFGEDPGKDYFGEDPGNCGKQNLEVQLDDGLYQSFKQNLTFEHGRSGKGSTEDEQLKAVAEDVAASVXHPCSPSNPNLQARDVSFHENIEDGDIQYNLINVKCRDKTQDVKSKPPEKANFGFPASGVGRLQIIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKASCDYDDVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPNSCDLEWKALMESCWSSEPSERPTFTEIADELRSMASKRPNQQLQQVHK

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00127	251591	258188	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:2.1.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000127s00009183.1	PF00564.19	PB1	162	245	9.10E-18
Glyur000127s00009183.1	PF07714.12	Pkinase_Tyr	1099	1367	1.00E-56

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.083
SRR1783600	control	16.135
SRR1783602	moderate drought stress	15.478
SRR1811619	moderate drought stress	15.484

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.313
DRR006520	Root Summer glycyrrhizin high producing strain	11.159
DRR006521	Root Winter glycyrrhizin high producing strain	7.840
DRR006522	Root Winter glycyrrhizin high producing strain	7.574
DRR006523	Root Summer glycyrrhizin low producing strain	13.945
DRR006524	Root Summer glycyrrhizin low producing strain	13.988
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.426
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.469

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.462
SRR2868004	Drought Stress (root)	23.037
SRR2967015	Control (root)	18.096

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.499
SRR9715740	Leaf	6.058
SRR9715741	Leaf	5.082
SRR9715739	Root	5.323
SRR9715742	Root	17.676
SRR9715743	Root	14.932

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.320
SRR8749028	MeJA induced 9h	17.100
SRR8749029	MeJA induced 9h	9.986
SRR8749030	Uninduced	17.049
SRR8749031	Uninduced	10.194
SRR8749032	Uninduced	7.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.182
SRR8400027	Control - Root	19.543