Gene detail information of Glyur000127s00009165 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G12646.1 | 3.00E-96 | PLATZ transcription factor family protein |
| NR | XP_004508407.1 | 1.27E-162 | PREDICTED: uncharacterized protein LOC101509020 [Cicer arietinum] |
| trEMBL | tr|I1LZV9|I1LZV9_SOYBN | 5.00E-161 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G23360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00127 | 157227 | 159836 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PLATZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000127s00009165.1 | PF04640.9 | PLATZ | 63 | 134 | 1.40E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.645 |
| SRR1783600 | control | 2.568 |
| SRR1783602 | moderate drought stress | 4.938 |
| SRR1811619 | moderate drought stress | 4.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.534 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.564 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.294 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.203 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.875 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.912 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.523 |
| SRR2868004 | Drought Stress (root) | 7.739 |
| SRR2967015 | Control (root) | 9.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.252 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.173 |
| SRR9715739 | Root | 2.100 |
| SRR9715742 | Root | 1.483 |
| SRR9715743 | Root | 1.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 62.846 |
| SRR8749028 | MeJA induced 9h | 17.191 |
| SRR8749029 | MeJA induced 9h | 34.702 |
| SRR8749030 | Uninduced | 24.777 |
| SRR8749031 | Uninduced | 12.837 |
| SRR8749032 | Uninduced | 31.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.134 |
| SRR8400027 | Control - Root | 4.102 |