Gene detail information of Glyur000127s00009162 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11090.1 | 1.00E-34 | serine-rich protein-related |
| NR | AFK41588.1 | 3.58E-82 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SMU6|I3SMU6_MEDTR | 1.00E-82 | Uncharacterized protein {ECO:0000313|EMBL:AFK41588.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00127 | 137350 | 137967 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 95.032 |
| SRR1783600 | control | 93.781 |
| SRR1783602 | moderate drought stress | 175.034 |
| SRR1811619 | moderate drought stress | 176.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 66.099 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 70.610 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 635.420 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 599.762 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 85.983 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 84.502 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 68.189 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 66.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.654 |
| SRR2868004 | Drought Stress (root) | 55.503 |
| SRR2967015 | Control (root) | 92.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 327.702 |
| SRR9715740 | Leaf | 172.950 |
| SRR9715741 | Leaf | 222.996 |
| SRR9715739 | Root | 458.268 |
| SRR9715742 | Root | 267.985 |
| SRR9715743 | Root | 294.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 196.759 |
| SRR8749028 | MeJA induced 9h | 264.795 |
| SRR8749029 | MeJA induced 9h | 136.620 |
| SRR8749030 | Uninduced | 88.331 |
| SRR8749031 | Uninduced | 44.791 |
| SRR8749032 | Uninduced | 95.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 65.515 |
| SRR8400027 | Control - Root | 75.029 |