Gene detail information of Glyur000127s00009159 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80530.1 | 1.00E-107 | Major facilitator superfamily protein |
| NR | XP_003609485.1 | 0 | hypothetical protein MTR_4g116210 [Medicago truncatula] |
| trEMBL | tr|G7JGM2|G7JGM2_MEDTR | 0 | Nodulin-like/MFS transporter {ECO:0000313|EMBL:AES91682.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00127 | 123487 | 126317 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000127s00009159.1 | PF06813.8 | Nodulin-like | 11 | 258 | 5.80E-78 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.037 |
| SRR1783600 | control | 4.767 |
| SRR1783602 | moderate drought stress | 3.454 |
| SRR1811619 | moderate drought stress | 3.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.318 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.245 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.995 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.662 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.029 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.090 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.716 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.082 |
| SRR2868004 | Drought Stress (root) | 3.591 |
| SRR2967015 | Control (root) | 3.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.211 |
| SRR9715740 | Leaf | 7.692 |
| SRR9715741 | Leaf | 2.847 |
| SRR9715739 | Root | 1.546 |
| SRR9715742 | Root | 5.023 |
| SRR9715743 | Root | 3.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.966 |
| SRR8749028 | MeJA induced 9h | 7.752 |
| SRR8749029 | MeJA induced 9h | 4.766 |
| SRR8749030 | Uninduced | 5.417 |
| SRR8749031 | Uninduced | 4.049 |
| SRR8749032 | Uninduced | 3.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.997 |
| SRR8400027 | Control - Root | 8.935 |