Gene detail

Gene detail information of Glyur000127s00009135.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G15690.1	Inorganic H pyrophosphatase family protein
NR	XP_003542656.1	PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Glycine max]
COG	YP_001840784.1	membrane-bound proton-translocating pyrophosphatase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Swissprot	tr\|P21616\|AVP_VIGRR	Pyrophosphate-energized vacuolar membrane proton pump
trEMBL	tr\|B6DXD7\|B6DXD7_MEDTR	Vacuolar-type H-pyrophosphatase {ECO:0000313\|EMBL:ACI22377.1}

Sequence

Transcript Sequence

>Glyur000127s00009135.1
TTCATATTCTCAACCACACACCCCAACACACTCTCACACACACCACCACCTTCTGTCTCTCTCTCTCTCTCCTCCTCATCACCATTTCCCAGTCACACTCCTATCTTCTCTCTCCCCCACATATAAAACCCTCTCCACCCCCAACCATTTCTTTTCACTCATTCCTTCGCTCCCCCCTTTCTCTCTCTTCTCTCTCACTCATTTCCCCGCACCTCACTCCCTTCTNCGTTCGCCACACACTTGAGTTGTTCGCCGCCATGGGAGCAGCGATTCTCCCAGATCTCGGAACCGAGATTTTGATTCCCGTTTGCGCCGTCATTGGAATCGCCTTTGCCCTCTTCCAGTGGTTGCTCGTCTCTAAGGTTAAGCTCACCGCTGCAAGAGANGCTTCCACCGACGGCGCCGGTAAGAATGGCTATAACGATTACCTCATCGAAGAAGAGGAGGGCCTCAACGACCACAACGTCGTCCTCAAATGTGCTGAAATCCAGAACGCTATCTCCGAAGGAGCAACCTCGTTCCTTTTCACTGANTATAAGTATGTGGGAATCTTCATGGTGGCTTTTGCCATTTTGATATTCCTTTTCCTTGGCTCNGTGGAAGGATTCAGCACAAGCCACCAGCCTTGCACCTATGATCAAACTAAGATGTGTAAGCCAGCTCTTGCAACTGCCCTTTTCAGCACCATATCTTTCCTGCTTGGTGGCATCACATCANTTATTTCTGGTTTCCTTGGAATGAAAATTGCAACTTATGCCAATGCAAGAACCACCCTGGAGGCACGAAAGGGTGTTGGGAAGGCTTTCATTACTGCATTTAGATCAGGTGCAGTTATGGGATTTCTTCTTGCTGCAAATGGTCTTTTGGTTCTTTACATTACCATCAACCTGTTNAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATTACTGGATATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTTGGNAAGGTTGAAAGAAACATTCCCGAGGATGACCCAAGAAATCCAGCTGTGATTGCTGACAATGTTGGTGATAATGTTGGGGATATAGCTGGTATGGGATCTGATCTTTTTGGCTCATATGCTGAGTCATCATGTGCTGCTCTTGTTGTTGCTTCCATCTCTTCTTTTGGGGTGAATCATGAATTGACTGCCATGTTATACCCTCTCATCATCAGTTCTGTGGGTATCCTTGTTTGTTTGCTCACCACCTTATTTGCAACCGACTTTTTCGAGATCAAGCTTGTAAAGGAAATTGAGCCAGCATTGAAAAAGCAGCTCATCATTTCAACAGCACTGATGACTGTTGGGGTTGCCATCGTTAGTTGGATNGCACTTCCATCTTCCTTCACTATCTTCAATTTTGGAGTGCAGAAAGCCGTCAAGAACTGGCAGCTATTCTTGTGTGTCGCTGTTGGTCTCTGGGCAGGGCTCATCATCGGATTTGTAACTGAGTACTATACTAGCAATGCATATAGTCCTGTGCAAGATGTTGCGGACTCCTGCAGGACTGGTGCTGCTACCAATGTTATATTTGGCCTCGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCTATTGCAGTTAGTATTTTTGTTAGTTTCAGCTTTGCTGCCATGTATGGTATTGCTGTTGCTGCACTTGGGATGCTGAGTACCATAGCCACTGGATTGGCCATCGATGCGTATGGTCCAATCAGTGATAATGCTGGAGGTATTGCTGAGATGGCTGGGATGAGTCACAGAATTCGAGAGAGAACCGATGCCCTTGATGCTGCAGGAAACACAACTGCCGCCATTGGGAAGGGGTTTGCGATTGGTTCTGCCGCCCTTGTGTCTCTGGCCCTCTTTGGTGCCTTTGTGAGCCGAGCTGCTATTTCAACAGTCGATGTGCTGACTCCAAAGGTTTTCATCGGTTTGATNGTGGGTGCCATGCTTCCCTACTGGTTTTCCGCCATGACCATGAAGAGTGTGGGAAGTGCTGCTTTGAAGATGGTTGAGGAAGTCCGCAGGCAATTCAACACCATCCCGGGCCTGATGGAGGGAACCGCCAAGCCTGACTATGCCANATGTGTTAAGATCTCCACCGACGCCTCCATCAAAGAAATGATCCCACCTGGTGCCCTTGTCATGCTCACACCCCTCATTGTAGGGATCTTTTTCGGTGTGGAAACGCTCTCNGGTGTCCTCGCCGGATCTCTGGTGTCTGGTGTACAGATTGCTATCTCTGCATCCAACACCGGTGNTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGAGCATCTGAGCATGCAAGNAGTCTTGGTCCAAAGGGGTCAGATCCACACAAGGCAGCAGTTATTGGTGACACNATTGGGGACCCTCTCAAGGACACATCTGGACCCTCACTTAACATCCTCATCAAGCTGATGGCCGTTGAATCTCTCGTCTTTGCTCCCTTCTTCGCTACCCACGGTGGCCTACTCTTCAAAATCTAAGATTGTTGAAACAGAGAGAGACAGAGACAGAGACAGAGACAGAGAAAAGAGAGCATCATCGTCCCATCAATTTCCCATAATATCCTTTGCGCCTTTTCTTTCTTTTCTTTAGTATTAGTTCCGCTGTGAATTGTGATATGCCAAATTCTATTGTTTTTTAAAATCTTCTTATTATCCCCTCCACCCCACATGGCAAAATCCCTCCCTAGCTTTGAGATACTTAATTAGGCCGAATCTCTTCTGCAGAGAAAAATTTTCCTTGTANACAGGAGGTTGGTGACGATGACGATGAATTTTACTATCTCTTCCGCGTGCTCTTTTTCAGATGTTTTCTTTATTAGAAACAGGCTGTCCGCAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00127	10557	15271	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01507	ppa	EC:3.6.1.1	Oxidative phosphorylation	map00190

Gene Ontology

biological_process
GO:0015992 proton transport

cellular_component
GO:0016020 membrane

molecular_function

GO:0004427 inorganic diphosphatase activity

GO:0009678 hydrogen-translocating pyrophosphatase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000127s00009135.1	PF03030.11	H_PPase	20	752	2.70E-263

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	324.034
SRR1783600	control	325.132
SRR1783602	moderate drought stress	343.584
SRR1811619	moderate drought stress	341.321

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	216.387
DRR006520	Root Summer glycyrrhizin high producing strain	212.126
DRR006521	Root Winter glycyrrhizin high producing strain	143.615
DRR006522	Root Winter glycyrrhizin high producing strain	139.522
DRR006523	Root Summer glycyrrhizin low producing strain	198.581
DRR006524	Root Summer glycyrrhizin low producing strain	200.082
DRR006525	Leaf Summer glycyrrhizin high producing strain	116.339
DRR006526	Leaf Summer glycyrrhizin high producing strain	114.914

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	305.107
SRR2868004	Drought Stress (root)	316.524
SRR2967015	Control (root)	324.264

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	156.649
SRR9715740	Leaf	160.409
SRR9715741	Leaf	141.516
SRR9715739	Root	686.976
SRR9715742	Root	498.010
SRR9715743	Root	543.251

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	298.472
SRR8749028	MeJA induced 9h	458.291
SRR8749029	MeJA induced 9h	285.175
SRR8749030	Uninduced	309.722
SRR8749031	Uninduced	223.387
SRR8749032	Uninduced	247.299

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	272.897
SRR8400027	Control - Root	350.182