Gene detail information of Glyur000126s00013669 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22640.1 | 1.00E-34 | BRICK1, putative |
| NR | XP_003517200.1 | 1.17E-53 | PREDICTED: protein BRICK 1 isoformX1 [Glycine max] |
| Swissprot | tr|Q94JY4|BRK1_ARATH | 1.00E-51 | Protein BRICK 1 |
| trEMBL | tr|V7CJM7|V7CJM7_PHAVU | 4.00E-54 | Uncharacterized protein {ECO:0000313|EMBL:ESW30324.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00126 | 276521 | 277383 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.132 |
| SRR1783600 | control | 18.076 |
| SRR1783602 | moderate drought stress | 22.490 |
| SRR1811619 | moderate drought stress | 22.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.806 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.489 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.995 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.131 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.787 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.424 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.745 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.775 |
| SRR2868004 | Drought Stress (root) | 31.390 |
| SRR2967015 | Control (root) | 31.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.322 |
| SRR9715740 | Leaf | 18.569 |
| SRR9715741 | Leaf | 16.336 |
| SRR9715739 | Root | 6.266 |
| SRR9715742 | Root | 7.950 |
| SRR9715743 | Root | 5.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.523 |
| SRR8749028 | MeJA induced 9h | 11.886 |
| SRR8749029 | MeJA induced 9h | 13.306 |
| SRR8749030 | Uninduced | 4.928 |
| SRR8749031 | Uninduced | 3.310 |
| SRR8749032 | Uninduced | 3.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.588 |
| SRR8400027 | Control - Root | 38.136 |