Gene detail

Gene detail information of Glyur000126s00013668.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67720.1	1.00E-100	Leucine-rich repeat protein kinase family protein
NR	AAV88623.1	0	nodulation receptor kinase [Sesbania rostrata]
COG	YP_001276011.1	4.00E-16	protein kinase [Roseiflexus sp. RS-1]
Swissprot	tr\|Q8LKZ1\|NORK_PEA	0	Nodulation receptor kinase (Precursor)
trEMBL	tr\|Q5MKK9\|Q5MKK9_SESRO	0	Nodulation receptor kinase {ECO:0000313\|EMBL:AAV88623.1}

Sequence

Transcript Sequence

>Glyur000126s00013668.1
ATGGAGCTACAAGATACTTGGATATTAAGATTGGTTGTGTTATGTGCTCTTTGTCTGTGTTTATTTATCAGATCAGCTTCTGCAACTGAAGGGTTTGAGAGCATAGCATGCTGTGCTGATTCAAATTACACAGATCCGGTGACAACCTTAAATTATACTACAGATTACAGTTGGTTCTCTGATAAAAGAAGTTGCAGACAAATACCTGAATTTGTGCTAAACCACAGAAGCAATGAAAATGTTCGGCTGTTTGATATAGATGAGGGAAAGAGATGTTACAATTTGCCAACAATTAAGAACAAAGTATATCTGATAAGGGGCACATTTCCATTTGATAGTTTAAATTCTTCCTTCTATGTTTCAATAGGGGTCACAGAACTAGGTGCTGTAAGATCATCCAGGCTCCAGGACTTAGAAATTGAGGGAGTTTTCAGAGCCACAAAAGACTACATAGACTTCTGTTTAGTCAAGGGGGAGGCTATTCCCTTTATTTCTCAGCTTGAATTAAGGCCATTACCTGAAGAATTCCTACATGATTTGCCTACCAGTGTTTTAAAACTGATAAGCAGAAACAATCTTTGGAGCACAAAAGATGACATCAGGTTCCCAGTTGACCAAAGTGATAGAATCTGGAAAGCAACTTCAAGTCTATCATCTGCTCTTCCACTGTCTATCAATATCAGCAATGTTGACCTCAAAGCCAATGTGACACCTCCTCTACAAGTCCTACAAACAGCTCTTACCCACCCTGAGCGGTTGGAGTTCACCCACGATGGCCTTGAGACCGAGGATTATGGATACCGCGTGTTTCTCTACTTCCTTGAATTAAATAGCACACTCAAAGCAGGCCAAAGGGTGTTTGACATCTATGTTAACAGTGAGATTAAAAAGAAGAGATTTGACGTATTGGCTGGAGGGTCCAACTATAGTTACACTGTCTTGAACGTTTCAGCAAATGGATCACTCAATATAACCTTGGTCAAGGCATCTGGGTCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTGCAAGTGAGATCATGGATTGAAGAGACCAACCAAACAGAAGTGGAAGTTATTCAGAAGATGAGAGAAGAATTGTTGTTGCAAAACCAAGACAATAAGGCACTGGAGAGTTGGACTGGAGACCCTTGCCTTCTTTCCCCTTGGAAAGGAATAGCATGTGATGGTTCAAATGGTTCATCATCTGTTATCACTAAGCTGGATCTTTCCTACAGTAATCTCAAAGGACCAATTCCTTCCCGTGTCACTGAGATGACCAACTTAAAAATACTGAACTTGAGCCACAACAGTTTTGTTGGTTATATCCCCTCGTTTCCGCTGTCCTCCTTGTTGATATCAGTAGATCTGAGCTACAATGATCTTGAGGGACCACTTCCAGAATCCATTATCTCACTGCCGCATTTAAAATCGTTATATTTTGGCTGCAACCAACACATGAGCGAAGAGGATCACNCAAAATTGAACAGTTCATTAATCAATACAGATTATGGGAGATGCAAAGCAAAAGATCCCAAATTTGGACATGTANTTGTTATTGGAGCTATTACAGGTGGATCACTTCTGATTACTTTGGCTGTTGGAGTTCTTTTTGTGTGCCGTTACAGACAGAAATTAATTCCATGGGAAGGATTTGGTGGAAAGAACTACCCAATGGCAACAAATGTAATTTTCTCTTTGCCAAGCAAAGACGATTTCTTCATAAAGTCTTTATCAATTCAAACATACACTTTGGAGTATATAGAGGTGGCAACAGAGAGGTACAAAACTNTGATAGGTGAAGGAGGGTTTGGCTCTGTTTACCGGGGGACTCTAGATGACGGTCAAGAAGTGGCAGTGAAACTAAACCTACTTTCTGCAATACAGCATGAGAACCTGGTGCCTCTTCTTGGTTATTGTAATGAAAATGATCAACAAATTCTTGTGTATCCTTTCATGTCCAATGGCTCTTTGCAAGATAGACTATATGGAGAACCAGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTAGGTGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCAGGACGTTCCGTGATACACAGGGACGTTAAATCAAGCAATATACTGCTGGATCATAGCATGNGTGCTAAGGTTGCAGATTTCGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTTATGTCTCCCTTGAAGTAAGAGGAACTGCAGGGTATCTGGATCCTGAGTACTACAATACCCAACAATTATCTGAAAAGAGTGATGTGTTCAGCTTTGGCGTGGTTCTACTTGAAATAGCTAAGCCATACATAAGAGCATCAAAGGTGGATGAAATTGTAGATCCTGGCATCAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTACAATGTCTTGAACCTTTCTCAGCATATAGGCCATGCATGGTTGANATTGTCCGTGAGTTGGAGGATGCTCTCATTATAGAAAACAATGCATCTGAATACATGAAGTCCATAGACAGCCTTGGAGGATCCAACCGCTACTCAATTGTCATTGAGAAANGGGTGCTGCCCTCAACTACTTCTACAGCAGAATCAACCGTCACAACCCAAACCTTGTCCCACCCACAGCCAAGATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00126	266100	273262	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.8.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000126s00013668.1	PF12819.2	Malectin_like	35	346	4.10E-66
Glyur000126s00013668.1	PF07714.12	Pkinase_Tyr	598	829	1.60E-34

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	24.390
SRR1783600	control	24.581
SRR1783602	moderate drought stress	7.580
SRR1811619	moderate drought stress	7.554

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.822
DRR006520	Root Summer glycyrrhizin high producing strain	2.679
DRR006521	Root Winter glycyrrhizin high producing strain	0.459
DRR006522	Root Winter glycyrrhizin high producing strain	0.493
DRR006523	Root Summer glycyrrhizin low producing strain	0.507
DRR006524	Root Summer glycyrrhizin low producing strain	0.521
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.348
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.267

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	63.141
SRR2868004	Drought Stress (root)	80.095
SRR2967015	Control (root)	62.135

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.066
SRR9715740	Leaf	0.024
SRR9715741	Leaf	0.081
SRR9715739	Root	4.129
SRR9715742	Root	7.472
SRR9715743	Root	6.211

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.713
SRR8749028	MeJA induced 9h	2.746
SRR8749029	MeJA induced 9h	2.703
SRR8749030	Uninduced	2.618
SRR8749031	Uninduced	5.245
SRR8749032	Uninduced	1.645

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.696
SRR8400027	Control - Root	22.720