Gene detail information of Glyur000126s00013661 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22660.2 | 4.00E-14 | Protein of unknown function (duplicated DUF1399) |
| NR | XP_004512547.1 | 5.24E-21 | PREDICTED: uncharacterized protein LOC101506159 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7LF15|K7LF15_SOYBN | 5.00E-21 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G33540.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00126 | 239115 | 246310 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000126s00013661.2 | PF07173.7 | DUF1399 | 19 | 163 | 6.70E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.766 |
| SRR1783600 | control | 22.742 |
| SRR1783602 | moderate drought stress | 21.876 |
| SRR1811619 | moderate drought stress | 21.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.721 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.415 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.001 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.392 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 76.525 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 76.608 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.733 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 234.389 |
| SRR2868004 | Drought Stress (root) | 440.007 |
| SRR2967015 | Control (root) | 554.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.855 |
| SRR9715740 | Leaf | 30.611 |
| SRR9715741 | Leaf | 27.318 |
| SRR9715739 | Root | 8.528 |
| SRR9715742 | Root | 37.072 |
| SRR9715743 | Root | 31.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 39.632 |
| SRR8749028 | MeJA induced 9h | 131.232 |
| SRR8749029 | MeJA induced 9h | 39.344 |
| SRR8749030 | Uninduced | 150.807 |
| SRR8749031 | Uninduced | 182.690 |
| SRR8749032 | Uninduced | 62.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 360.735 |
| SRR8400027 | Control - Root | 427.821 |